General information
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| PDB ID | 1DC1 |
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| Title | RESTRICTION ENZYME BSOBI/DNA COMPLEX STRUCTURE: ENCIRCLEMENT OF THE DNA AND HISTIDINE-CATALYZED HYDROLYSIS WITHIN A CANONICAL RESTRICTION ENZYME FOLD | ||||
| PDB header | HYDROLASE/DNA | ||||
| Date | 1999-11-04 | ||||
| Experimental method | X-RAY DIFFRACTION | ||||
| Resolution (A) | 1.7 | ||||
| Kind | dna | ||||
| Organism | GEOBACILLUS STEAROTHERMOPHILUS | ||||
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Quick Links
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Composition of PDB entry and biounits
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| File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
| PDB entry: | |||||
| pdb1dc1.pdb | AB | WC | 0 |
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| Biounits: | |||||
| 1dc1.pdb1.pdb | AB | WC | 1 |
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Pfam domains
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| Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
Endonuc-BsobI
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Domain | P70985_7-323 | 6.7e-139 | 1 |
CL0236
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A | 7 | 323 | CW | H-Bb H-Mj H-Mn S-Bb L-Bb L-Mj |
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Endonuc-BsobI
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Domain | P70985_7-323 | 6.8e-139 | 1 |
CL0236
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B | 7 | 323 | CW | H-Bb H-Mj H-Mn S-Bb L-Bb L-Mj |
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SCOP domains
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| Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Class: Alpha and beta proteins (a/b)
Fold: Restriction endonuclease-like
Superfamily: Restriction endonuclease-like
Family: Restriction endonuclease BsobI
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Restriction endonuclease BsobI | A | N/A | N/A | CW | H-Bb H-Mj H-Mn S-Bb L-Bb L-Mj |
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Class: Alpha and beta proteins (a/b)
Fold: Restriction endonuclease-like
Superfamily: Restriction endonuclease-like
Family: Restriction endonuclease BsobI
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Restriction endonuclease BsobI | B | N/A | N/A | CW | H-Bb H-Mj H-Mn S-Bb L-Bb L-Mj |
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| GO terms | ||
| Protein chains: | GO type: | GO description: |
| A/B=1-323 | F | Type II site-specific deoxyribonuclease activity |
| A/B=1-323 | F | DNA binding |
| A/B=1-323 | F | metal ion binding |
| A/B=1-323 | P | DNA restriction-modification system |
| A/B=1-323 | P | nucleic acid phosphodiester bond hydrolysis |
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Sequences
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Download file with secondary structure created by Stride
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1dc1.pdb1.pdb:
[
download sequences in FASTA format
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C (dna):
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W (dna):
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A (protein):
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B (protein):
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