General information
PDB ID 1JGG
Title EVEN-SKIPPED HOMEODOMAIN COMPLEXED TO AT-RICH DNA
PDB header TRANSCRIPTION/DNA
Date 2001-06-25
Experimental method X-RAY DIFFRACTION
Resolution (A) 2
Kind dna
Organism DROSOPHILA MELANOGASTER
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Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1jgg.pdb AB CD 0
Biounits:
1jgg.pdb1.pdb AB CD 1
Pfam domains
Name: Type: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Action:
Homeobox Domain 3.2e-23 1 CL0123 A 103 158 CD
Homeobox Domain 3.2e-23 1 CL0123 B 303 358 CD
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Homeodomain
Even-skipped homeodomain A N/A N/A CD  H-Bb H-Mj L-Bb L-Mn 
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Homeodomain
Even-skipped homeodomain B N/A N/A CD  H-Bb H-Mj L-Bb L-Mn 
GO terms
Protein chains: GO type: GO description:
A/B=70-129 C nucleus
A/B=70-129 F RNA polymerase II distal enhancer sequence-specific DNA binding
A/B=70-129 F RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
A/B=70-129 P negative regulation of transcription from RNA polymerase II promoter
A/B=70-129 P trunk segmentation
A/B=70-129 P negative regulation of cardioblast cell fate specification
A/B=70-129 P motor axon guidance
A/B=70-129 P anterior/posterior axis specification, embryo
A/B=70-129 P periodic partitioning by pair rule gene
A/B=70-129 P cephalic furrow formation
A/B=70-129 P posterior head segmentation
A/B=70-129 P muscle organ development
A/B=70-129 P central nervous system development
A/B=70-129 P heart development
A/B=70-129 P positive regulation of transcription from RNA polymerase II promoter
A/B=70-129 P regulation of axonogenesis
A/B=70-129 P germ-band extension
A/B=70-129 P cell fate determination
Sequences
Download file with secondary structure created by Stride  
1jgg.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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