Quick Links
![]() |
||||||||||||||||||||
|
||||||||||||||||||||
Composition of PDB entry and biounits
![]() |
|||||
File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1k4t.pdb | A | BCD | 0 |
![]() ![]() |
|
Biounits: | |||||
1k4t.pdb1.pdb | A | BCD | 1 |
![]() ![]() ![]() |
|
Pfam domains
![]() |
|||||||||||
Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
![]() |
Domain | P11387_432-665 | 8.5e-103 | 1 |
![]() |
A | 432 | 665 | BD | H-Bb H-Mn L-Bb L-Mj |
![]() ![]() |
![]() |
Family | P11387_215-429 | 1.4e-101 | 1 | No_clan | A | 215 | 429 | BCD | H-Bb S-Bb S-Mj L-Bb L-Mn |
![]() ![]() |
![]() |
Family | P11387_695-765 | 5.2e-31 | 1 | No_clan | A | 695 | 765 | CB | H-Bb |
![]() ![]() |
SCOP domains
![]() |
|||||||
Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
Eukaryotic DNA topoisomerase I, dispensable insert domain | A | 641 | 712 | - |
![]() ![]() |
||
Eukaryotic DNA topoisomerase I, catalytic core | A | 431 | 640 | CB | H-Bb H-Mn L-Bb |
![]() ![]() |
|
Eukaryotic DNA topoisomerase I, catalytic core | A | 431 | 640 | BD | H-Bb H-Mn L-Bb |
![]() ![]() |
|
Eukaryotic DNA topoisomerase I, catalytic core | A | 713 | 765 | CB | H-Bb |
![]() ![]() |
|
Eukaryotic DNA topoisomerase I, catalytic core | A | 713 | 765 | BD | H-Bb |
![]() ![]() |
|
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment | A | 201 | 430 | BCD | H-Bb S-Bb S-Mj L-Bb |
![]() ![]() |
|
GO terms | ||
Protein chains: | GO type: | GO description: |
A=174-765 | C | cytoplasmic mRNA processing body |
A=174-765 | C | replication fork protection complex |
A=174-765 | C | perikaryon |
A=174-765 | C | nucleolus |
A=174-765 | C | nucleoplasm |
A=174-765 | F | ATP binding |
A=174-765 | F | DNA topoisomerase type I activity |
A=174-765 | F | chromatin binding |
A=174-765 | F | DNA topoisomerase (ATP-hydrolyzing) activity |
A=174-765 | P | chromatin remodeling |
A=174-765 | P | embryonic cleavage |
A=174-765 | P | DNA topological change |
A=174-765 | P | chromosome segregation |
A=174-765 | P | programmed cell death |
A=174-765 | P | phosphorylation |
A=174-765 | P | response to drug |
A=174-765 | P | DNA replication |
A=174-765 | P | virus-host interaction |
Sequences
![]() |
![]() |
1k4t.pdb1.pdb:
[
download sequences in FASTA format
]
|
B (dna):
Click "SHOW" for view sequence
C (dna):
Click "SHOW" for view sequence
D (dna):
Click "SHOW" for view sequence
A (protein):
Click "SHOW" for view sequence
|
|