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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1oh7.pdb | AB | EF | 0 |
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Biounits: | |||||
1oh7.pdb1.pdb | AB | EF | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | P23909_610-797 | 6.2e-77 | 1 |
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A | 610 | 797 |
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Domain | P23909_14-123 | 1.4e-42 | 1 | No_clan | A | 11 | 123 | EF |
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Domain | P23909_272-559 | 5.3e-40 | 1 | No_clan | A | 272 | 559 | F |
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Domain | P23909_131-256 | 4.9e-33 | 1 | No_clan | A | 131 | 256 |
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Domain | P23909_428-519 | 1e-28 | 1 | No_clan | A | 428 | 519 | F |
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Domain | P23909_610-797 | 3.4e-78 | 1 |
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B | 610 | 797 |
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Domain | P23909_272-559 | 4.8e-40 | 1 | No_clan | B | 272 | 559 | EF |
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Domain | P23909_131-256 | 4.5e-33 | 1 | No_clan | B | 131 | 256 |
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Domain | P23909_428-519 | 9.6e-29 | 1 | No_clan | B | 428 | 519 | EF |
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Domain | P23909_14-123 | 8.6e-25 | 1 | No_clan | B | 14 | 123 |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
DNA repair protein MutS, domain III | A | 270 | 566 | F | S-Bb L-Bb |
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DNA repair protein MutS, domain III | B | 270 | 566 | EF | S-Bb L-Bb |
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DNA repair protein MutS, domain I | A | 2 | 116 | EF | H-Bb S-Bb S-Mn L-Bb L-Mn |
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DNA repair protein MutS, domain I | B | 14 | 116 | - |
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DNA repair protein MutS, the C-terminal domain | A | 567 | 800 | - |
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DNA repair protein MutS, domain II | A | 117 | 269 | - |
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DNA repair protein MutS, the C-terminal domain | B | 567 | 800 | - |
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DNA repair protein MutS, domain II | B | 117 | 269 | - |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A/B=1-800 | C | mismatch repair complex |
A/B=1-800 | F | DNA binding, bending |
A/B=1-800 | F | ATP binding |
A/B=1-800 | F | adenine/cytosine mispair binding |
A/B=1-800 | F | DNA-dependent ATPase activity |
A/B=1-800 | F | ADP binding |
A/B=1-800 | F | damaged DNA binding |
A/B=1-800 | P | regulation of DNA recombination |
A/B=1-800 | P | mismatch repair |
Sequences
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1oh7.pdb1.pdb:
[
download sequences in FASTA format
]
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E (dna):
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F (dna):
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A (protein):
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B (protein):
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