NPIDB: 1OH7 structure

General information

PDB ID

1OH7

Title

THE CRYSTAL STRUCTURE OF E. COLI MUTS BINDING TO DNA WITH A G:G MISMATCH

PDB header

DNA BINDING

Date

2003-05-23

Experimental method

X-RAY DIFFRACTION

Resolution (A)

2.5

Kind

dna

Organism

ESCHERICHIA COLI


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Composition of PDB entry and biounits
File:	Protein chains:	DNA chains:	RNA chains:	No. of models:	Action:

PDB entry:

pdb1oh7.pdb	AB	EF		0

Biounits:

1oh7.pdb1.pdb	AB	EF		1

Pfam domains
Name:	Type:	Domain:	E-value:	Significance:	Clan:	Prot. chain:	Start res.:	End res.:	Nuc. chains:	Int. mode:	Action:

MutS_V	Domain	P23909_610-797	6.2e-77	1	CL0023	A	610	797
MutS_I	Domain	P23909_14-123	1.4e-42	1	No_clan	A	11	123	EF
MutS_III	Domain	P23909_272-559	5.3e-40	1	No_clan	A	272	559	F
MutS_II	Domain	P23909_131-256	4.9e-33	1	No_clan	A	131	256
MutS_IV	Domain	P23909_428-519	1e-28	1	No_clan	A	428	519	F
MutS_V	Domain	P23909_610-797	3.4e-78	1	CL0023	B	610	797
MutS_III	Domain	P23909_272-559	4.8e-40	1	No_clan	B	272	559	EF
MutS_II	Domain	P23909_131-256	4.5e-33	1	No_clan	B	131	256
MutS_IV	Domain	P23909_428-519	9.6e-29	1	No_clan	B	428	519	EF
MutS_I	Domain	P23909_14-123	8.6e-25	1	No_clan	B	14	123

SCOP domains
Classification:	Protein:	Prot. chain:	Start res.:	End res.:	Nuc. chains:	Int. mode:	Action:

Class: All alpha proteins Fold: DNA repair protein MutS, domain III Superfamily: DNA repair protein MutS, domain III Family: DNA repair protein MutS, domain III	DNA repair protein MutS, domain III	A	270	566	F	S-Bb L-Bb
Class: All alpha proteins Fold: DNA repair protein MutS, domain III Superfamily: DNA repair protein MutS, domain III Family: DNA repair protein MutS, domain III	DNA repair protein MutS, domain III	B	270	566	EF	S-Bb L-Bb
Class: Alpha and beta proteins (a+b) Fold: MutS N-terminal domain-like Superfamily: DNA repair protein MutS, domain I Family: DNA repair protein MutS, domain I	DNA repair protein MutS, domain I	A	2	116	EF	H-Bb S-Bb S-Mn L-Bb L-Mn
Class: Alpha and beta proteins (a+b) Fold: MutS N-terminal domain-like Superfamily: DNA repair protein MutS, domain I Family: DNA repair protein MutS, domain I	DNA repair protein MutS, domain I	B	14	116		-
Class: Alpha and beta proteins (a/b) Fold: P-loop containing nucleoside triphosphate hydrolases Superfamily: P-loop containing nucleoside triphosphate hydrolases Family: ABC transporter ATPase domain-like	DNA repair protein MutS, the C-terminal domain	A	567	800		-
Class: Alpha and beta proteins (a/b) Fold: Ribonuclease H-like motif Superfamily: DNA repair protein MutS, domain II Family: DNA repair protein MutS, domain II	DNA repair protein MutS, domain II	A	117	269		-
Class: Alpha and beta proteins (a/b) Fold: P-loop containing nucleoside triphosphate hydrolases Superfamily: P-loop containing nucleoside triphosphate hydrolases Family: ABC transporter ATPase domain-like	DNA repair protein MutS, the C-terminal domain	B	567	800		-
Class: Alpha and beta proteins (a/b) Fold: Ribonuclease H-like motif Superfamily: DNA repair protein MutS, domain II Family: DNA repair protein MutS, domain II	DNA repair protein MutS, domain II	B	117	269		-

GO terms
Protein chains:	GO type:	GO description:
A/B=1-800	C	mismatch repair complex
A/B=1-800	F	DNA binding, bending
A/B=1-800	F	ATP binding
A/B=1-800	F	adenine/cytosine mispair binding
A/B=1-800	F	DNA-dependent ATPase activity
A/B=1-800	F	ADP binding
A/B=1-800	F	damaged DNA binding
A/B=1-800	P	regulation of DNA recombination
A/B=1-800	P	mismatch repair

Sequences

Download file with secondary structure created by Stride

1oh7.pdb1.pdb: [ download sequences in FASTA format ]

E (dna):

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F (dna):

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A (protein):

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B (protein):

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