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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1xsl.pdb | AEIM | BCDFGHJKLNOP | 0 |
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Biounits: | |||||
1xsl.pdb1.pdb | A | BCD | 1 |
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1xsl.pdb2.pdb | E | FGH | 1 |
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1xsl.pdb3.pdb | I | JKL | 1 |
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1xsl.pdb4.pdb | M | NOP | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | Q9UGP5_386-496 | 6.9e-36 | 1 |
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A | 386 | 496 | BC |
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Domain | Q9UGP5_336-384 | 5.6e-21 | 1 |
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A | 336 | 384 | BC |
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Domain | Q9UGP5_253-318 | 2.6e-18 | 1 |
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A | 253 | 318 | DB |
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Domain | Q9UGP5_386-496 | 6.8e-36 | 1 |
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E | 386 | 496 | FG |
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Domain | Q9UGP5_336-384 | 5.5e-21 | 1 |
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E | 336 | 384 | FG |
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Domain | Q9UGP5_253-318 | 2.6e-18 | 1 |
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E | 253 | 318 | HF |
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Domain | Q9UGP5_386-496 | 6.9e-36 | 1 |
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I | 386 | 496 | JK |
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Domain | Q9UGP5_336-384 | 5.6e-21 | 1 |
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I | 336 | 384 | JK |
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Domain | Q9UGP5_253-318 | 2.6e-18 | 1 |
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I | 253 | 318 | LJ |
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Domain | Q9UGP5_386-496 | 6.9e-36 | 1 |
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M | 386 | 496 | NO |
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Domain | Q9UGP5_336-384 | 5.6e-21 | 1 |
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M | 336 | 384 | NO |
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Domain | Q9UGP5_253-318 | 2.6e-18 | 1 |
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M | 253 | 318 | PN |
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Family | Q9UGP5_502-574 | 5.3e-22 | 1 | No_clan | A | 502 | 574 | BC |
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Family | Q9UGP5_502-574 | 5.2e-22 | 1 | No_clan | E | 502 | 574 | FG |
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Family | Q9UGP5_502-574 | 5.3e-22 | 1 | No_clan | I | 502 | 574 | JK |
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Family | Q9UGP5_502-574 | 5.3e-22 | 1 | No_clan | M | 502 | 574 | NO |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
DNA polymerase lambda | A | 249 | 327 | DB | H-Bb L-Bb |
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DNA polymerase lambda | E | 251 | 327 | HF | H-Bb L-Bb |
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DNA polymerase lambda | I | 250 | 327 | LJ | H-Bb L-Bb |
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DNA polymerase lambda | M | 249 | 327 | PN | H-Bb L-Bb |
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DNA polymerase lambda | A | 329 | 385 | BC | - |
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DNA polymerase lambda | A | 386 | 575 | BC | - |
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DNA polymerase lambda | E | 329 | 385 | FG | - |
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DNA polymerase lambda | E | 386 | 575 | FG | - |
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DNA polymerase lambda | I | 329 | 385 | JK | - |
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DNA polymerase lambda | I | 386 | 575 | JK | - |
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DNA polymerase lambda | M | 329 | 385 | NO | - |
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DNA polymerase lambda | M | 386 | 575 | NO | - |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A/E/I/M=242-575 | C | nucleus |
A/E/I/M=242-575 | F | lyase activity |
A/E/I/M=242-575 | F | DNA-directed DNA polymerase activity |
A/E/I/M=242-575 | F | DNA binding |
A/E/I/M=242-575 | F | metal ion binding |
A/E/I/M=242-575 | P | nucleotide-excision repair |
A/E/I/M=242-575 | P | DNA replication |
A/E/I/M=242-575 | P | somatic hypermutation of immunoglobulin genes |
Sequences
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1xsl.pdb1.pdb:
[
download sequences in FASTA format
]
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B (dna):
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C (dna):
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D (dna):
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A (protein):
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1xsl.pdb2.pdb:
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]
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F (dna):
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G (dna):
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H (dna):
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E (protein):
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1xsl.pdb3.pdb:
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J (dna):
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K (dna):
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L (dna):
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I (protein):
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1xsl.pdb4.pdb:
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download sequences in FASTA format
]
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N (dna):
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O (dna):
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P (dna):
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M (protein):
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