General information
PDB ID 1AHD
Title DETERMINATION OF THE NMR SOLUTION STRUCTURE OF AN ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX
PDB header DNA BINDING PROTEIN/DNA
Date 1993-04-02
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism DROSOPHILA SUBOBSCURA
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1ahd.pdb P AB 16
Biounits:
1ahd.pdb1.pdb P AB 1
NMR models:
1ahd.MDL1.pdb P AB 1
1ahd.MDL2.pdb P AB 1
1ahd.MDL3.pdb P AB 1
1ahd.MDL4.pdb P AB 1
1ahd.MDL5.pdb P AB 1
1ahd.MDL6.pdb P AB 1
1ahd.MDL7.pdb P AB 1
1ahd.MDL8.pdb P AB 1
1ahd.MDL9.pdb P AB 1
1ahd.MDL10.pdb P AB 1
1ahd.MDL11.pdb P AB 1
1ahd.MDL12.pdb P AB 1
1ahd.MDL13.pdb P AB 1
1ahd.MDL14.pdb P AB 1
1ahd.MDL15.pdb P AB 1
1ahd.MDL16.pdb P AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Homeodomain Domain Q24645_314-370 5.5e-23 1 CL0123 P 2 58 AB  H-Bb H-Mj L-Bb L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Homeodomain
Antennapedia Homeodomain P N/A N/A AB -
GO terms
Protein chains: GO type: GO description:
P=297-363 C cytoplasm
P=297-363 C nucleus
P=297-363 F DNA binding
P=297-363 F DNA-binding transcription factor activity, RNA polymerase II-specific
P=297-363 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
P=297-363 F sequence-specific DNA binding
P=297-363 P anterior/posterior axis specification
P=297-363 P anterior/posterior pattern specification
P=297-363 P heart development
P=297-363 P lymph gland development
P=297-363 P midgut development
P=297-363 P muscle cell fate specification
P=297-363 P negative regulation of transcription by RNA polymerase II
P=297-363 P neuroblast development
P=297-363 P positive regulation of transcription by RNA polymerase II
P=297-363 P regulation of neurogenesis
P=297-363 P specification of segmental identity, antennal segment
P=297-363 P specification of segmental identity, thorax
P=297-363 P ventral cord development
Sequences
Download file with secondary structure created by Stride  
1ahd.MDL1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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P (protein): 
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