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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1ais.pdb | AB | CE | 0 |
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Biounits: | |||||
1ais.pdb1.pdb | AB | CE | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | P62001_99-181 | 3.6e-27 | 1 |
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A | 99 | 181 | CE | S-Bb S-Mn L-Bb L-Mn |
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Domain | P62001_8-90 | 4.8e-26 | 1 |
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A | 8 | 90 | CE | S-Bb S-Mn L-Bb L-Mn |
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Domain | P61999_212-282 | 5.8e-25 | 1 |
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B | 1212 | 1282 | E | H-Bb L-Bb |
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Domain | P61999_116-186 | 2.1e-20 | 1 |
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B | 1116 | 1186 |
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Domain | P61999_257-288 | 0.00054 | 0 |
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B | 1254 | 1294 | CE | H-Bb L-Bb |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
Transcription factor IIB (TFIIB), core domain | B | 1108 | 1205 | E | H-Bb |
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Transcription factor IIB (TFIIB), core domain | B | 1206 | 1300 | CE | H-Bb L-Bb |
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TATA-box binding protein (TBP), C-terminal domain | A | 1 | 92 | CE | S-Bb S-Mn L-Bb L-Mn |
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TATA-box binding protein (TBP), C-terminal domain | A | 93 | 181 | CE | S-Mn L-Bb |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A=1-181 | F | DNA binding |
A=1-181 | F | DNA-binding transcription factor activity |
A=1-181 | P | DNA-templated transcription, initiation |
B=101-300 | F | DNA-binding transcription factor activity |
B=101-300 | F | TBP-class protein binding |
B=101-300 | F | zinc ion binding |
B=101-300 | P | transcription preinitiation complex assembly |
Sequences
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1ais.pdb1.pdb:
[
download sequences in FASTA format
]
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C (dna):
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E (dna):
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A (protein):
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B (protein):
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