General information
PDB ID 1AM9
Title HUMAN SREBP-1A BOUND TO LDL RECEPTOR PROMOTER
PDB header TRANSCRIPTION/DNA
Date 1997-06-25
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1am9.pdb ABCD EFGH 0
Biounits:
1am9.pdb1.pdb ABCD EFGH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HLH Domain P36956_324-374 3.4e-18 1 No_clan A 324 374 FG  H-Bb H-Mj 
HLH Domain P36956_324-374 2.8e-18 1 No_clan B 324 374 FG  H-Bb H-Mj L-Bb 
HLH Domain P36956_324-374 3.7e-18 1 No_clan C 324 374 EH  H-Bb H-Mj 
HLH Domain P36956_324-374 3e-18 1 No_clan D 324 374 EH  H-Bb H-Mj L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: HLH-like
    Superfamily: HLH, helix-loop-helix DNA-binding domain
      Family: HLH, helix-loop-helix DNA-binding domain
SREBP-1a A N/A N/A FG  H-Bb H-Mj L-Bb 
Class: All alpha proteins
  Fold: HLH-like
    Superfamily: HLH, helix-loop-helix DNA-binding domain
      Family: HLH, helix-loop-helix DNA-binding domain
SREBP-1a B N/A N/A FG  H-Bb H-Mj L-Bb 
Class: All alpha proteins
  Fold: HLH-like
    Superfamily: HLH, helix-loop-helix DNA-binding domain
      Family: HLH, helix-loop-helix DNA-binding domain
SREBP-1a C N/A N/A EH  H-Bb H-Mj 
Class: All alpha proteins
  Fold: HLH-like
    Superfamily: HLH, helix-loop-helix DNA-binding domain
      Family: HLH, helix-loop-helix DNA-binding domain
SREBP-1a D N/A N/A EH  H-Bb H-Mj L-Bb 
GO terms
Protein chains: GO type: GO description:
A/B/C/D=319-400 C Golgi membrane
A/B/C/D=319-400 C nucleus
A/B/C/D=319-400 C integral to membrane
A/B/C/D=319-400 C nuclear envelope
A/B/C/D=319-400 C ER to Golgi transport vesicle membrane
A/B/C/D=319-400 C endoplasmic reticulum membrane
A/B/C/D=319-400 C endoplasmic reticulum
A/B/C/D=319-400 F sequence-specific DNA binding transcription factor activity
A/B/C/D=319-400 F sterol response element binding
A/B/C/D=319-400 P transcription, DNA-dependent
A/B/C/D=319-400 P lipid biosynthetic process
A/B/C/D=319-400 P regulation of transcription from RNA polymerase II promoter
A/B/C/D=319-400 P cellular response to starvation
A/B/C/D=319-400 P cholesterol metabolic process
A/B/C/D=319-400 P positive regulation of triglyceride biosynthetic process
A/B/C/D=319-400 P positive regulation of transcription from RNA polymerase II promoter
Sequences
Download file with secondary structure created by Stride  
1am9.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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G (dna): 
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H (dna): 
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A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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