General information
PDB ID 1AV6
Title VACCINIA METHYLTRANSFERASE VP39 COMPLEXED WITH M7G CAPPED RNA HEXAMER AND S-ADENOSYLHOMOCYSTEINE
PDB header TRANSFERASE/RNA
Date 1997-09-26
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.8
Kind rna
Organism VACCINIA VIRUS WR
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1av6.pdb A B 0
Biounits:
1av6.pdb1.pdb A B 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PARP_regulatory Domain P07617_5-296 7.3e-136 1 CL0063 A 5 296 B   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: S-adenosyl-L-methionine-dependent methyltransferases
    Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
      Family: mRNA cap methylase
Polymerase regulatory subunit VP39 A N/A N/A B -
GO terms
Protein chains: GO type: GO description:
A=3-297 C virion
A=3-297 F mRNA (nucleoside-2'-O-)-methyltransferase activity
A=3-297 F translation elongation factor activity
A=3-297 P transcription, DNA-dependent
A=3-297 P 7-methylguanosine mRNA capping
A=3-297 P regulation of mRNA 3'-end processing
Sequences
Download file with secondary structure created by Stride  
1av6.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (rna): 
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