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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1cdw.pdb | A | BC | 0 |
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Biounits: | |||||
1cdw.pdb1.pdb | A | BC | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | P20226_162-244 | 2.2e-32 | 1 |
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A | 158 | 240 | BC | S-Bb S-Mn L-Bb L-Mn |
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Domain | P20226_252-335 | 8.7e-32 | 1 |
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A | 248 | 331 | BC | S-Bb S-Mn L-Bb L-Mj L-Mn |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
TATA-box binding protein (TBP), C-terminal domain | A | 155 | 252 | BC | S-Bb S-Mn L-Bb L-Mn |
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TATA-box binding protein (TBP), C-terminal domain | A | 253 | 333 | BC | S-Bb S-Mn L-Bb L-Mn |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A=159-337 | C | transcription factor TFIID complex |
A=159-337 | C | male pronucleus |
A=159-337 | C | transcription factor TFIIA complex |
A=159-337 | C | nuclear euchromatin |
A=159-337 | C | cytoplasm |
A=159-337 | C | female pronucleus |
A=159-337 | F | transcription regulatory region DNA binding |
A=159-337 | F | sequence-specific DNA binding transcription factor activity |
A=159-337 | P | transcription elongation from RNA polymerase II promoter |
A=159-337 | P | virus-host interaction |
A=159-337 | P | transcription initiation from RNA polymerase II promoter |
A=159-337 | P | cell death |
A=159-337 | P | positive regulation of transcription, DNA-dependent |
A=159-337 | P | transcription from RNA polymerase III promoter |
A=159-337 | P | viral reproduction |
A=159-337 | P | spermatogenesis |
Sequences
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1cdw.pdb1.pdb:
[
download sequences in FASTA format
]
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B (dna):
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C (dna):
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A (protein):
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