General information
PDB ID 1D1U
Title USE OF AN N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE TO FACILITATE CRYSTALLIZATION AND ANALYSIS OF A PSEUDO-16-MER DNA MOLECULE CONTAINING G- A MISPAIRS
PDB header HYDROLASE/DNA
Date 1999-09-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism MOLONEY MURINE LEUKEMIA VIRUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1d1u.pdb A BC 0
Biounits:
1d1u.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RVT_1 Family P03355_760-932 8.4e-28 1 CL0027 A 101 273 BC   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: Reverse transcriptase
MMLV reverse transcriptase A N/A N/A BC -
GO terms
Protein chains: GO type: GO description:
A=683-937 C membrane
A=683-937 C viral capsid
A=683-937 C host cell plasma membrane
A=683-937 F RNA binding
A=683-937 F aspartic-type endopeptidase activity
A=683-937 F ribonuclease H activity
A=683-937 F structural molecule activity
A=683-937 F RNA-directed DNA polymerase activity
A=683-937 F DNA binding
A=683-937 F zinc ion binding
A=683-937 F DNA-directed DNA polymerase activity
A=683-937 P proteolysis
A=683-937 P DNA integration
A=683-937 P virion assembly
A=683-937 P nucleic acid phosphodiester bond hydrolysis
A=683-937 P RNA-dependent DNA replication
A=683-937 P DNA recombination
A=683-937 P virus-host interaction
Sequences
Download file with secondary structure created by Stride  
1d1u.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
Click "SHOW" for view sequence
C (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text