General information
PDB ID 1DUX
Title ELK-1/DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM DNA- BINDING SURFACE AFFECT DNA-RECOGNITION
PDB header TRANSCRIPTION/DNA
Date 2000-01-19
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.1
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1dux.pdb CF ABDE 0
Biounits:
1dux.pdb1.pdb CF ABDE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ets Domain P19419_6-86 4.2e-38 1 CL0123 C 6 86 AB  H-Bb H-Mj L-Bb 
Ets Domain P19419_6-86 4.2e-38 1 CL0123 F 6 86 DE  H-Bb H-Mj L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: ets domain
Elk-1 C N/A N/A AB  H-Bb H-Mj L-Bb 
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: ets domain
Elk-1 F N/A N/A DE  H-Bb H-Mj L-Bb 
GO terms
Protein chains: GO type: GO description:
C/F=1-94 C nucleus
C/F=1-94 F sequence-specific DNA binding transcription factor activity
C/F=1-94 F sequence-specific DNA binding
C/F=1-94 P Toll signaling pathway
C/F=1-94 P stress-activated MAPK cascade
C/F=1-94 P nerve growth factor receptor signaling pathway
C/F=1-94 P toll-like receptor 4 signaling pathway
C/F=1-94 P MyD88-dependent toll-like receptor signaling pathway
C/F=1-94 P positive regulation of transcription from RNA polymerase II promoter
C/F=1-94 P innate immune response
C/F=1-94 P TRIF-dependent toll-like receptor signaling pathway
C/F=1-94 P toll-like receptor 1 signaling pathway
C/F=1-94 P toll-like receptor 2 signaling pathway
C/F=1-94 P transcription, DNA-dependent
C/F=1-94 P toll-like receptor 3 signaling pathway
Sequences
Download file with secondary structure created by Stride  
1dux.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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D (dna): 
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E (dna): 
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C (protein): 
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F (protein): 
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