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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1e7k.pdb | AB | CD | 0 |
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Biounits: | |||||
1e7k.pdb1.pdb | A | C | 1 |
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1e7k.pdb2.pdb | B | D | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | P55769_20-114 | 2.2e-25 | 1 |
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A | 20 | 114 | C |
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Domain | P55769_20-114 | 2.1e-25 | 1 |
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B | 20 | 114 | D |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
Spliceosomal 15.5kd protein | A | N/A | N/A | C | - |
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Spliceosomal 15.5kd protein | B | N/A | N/A | D | - |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A/B=1-128 | C | box C/D snoRNP complex |
A/B=1-128 | C | dense fibrillar component |
A/B=1-128 | C | nucleolus |
A/B=1-128 | C | nucleoplasm |
A/B=1-128 | C | nucleus |
A/B=1-128 | C | precatalytic spliceosome |
A/B=1-128 | C | protein-containing complex |
A/B=1-128 | C | small-subunit processome |
A/B=1-128 | C | U2-type precatalytic spliceosome |
A/B=1-128 | C | U4/U6 x U5 tri-snRNP complex |
A/B=1-128 | C | U4atac snRNP |
A/B=1-128 | F | ATPase binding |
A/B=1-128 | F | box C/D snoRNA binding |
A/B=1-128 | F | RNA binding |
A/B=1-128 | F | U3 snoRNA binding |
A/B=1-128 | F | U4 snRNA binding |
A/B=1-128 | F | U4atac snRNA binding |
A/B=1-128 | P | box C/D snoRNP assembly |
A/B=1-128 | P | maturation of LSU-rRNA |
A/B=1-128 | P | maturation of SSU-rRNA |
A/B=1-128 | P | mRNA splicing, via spliceosome |
A/B=1-128 | P | rRNA processing |
A/B=1-128 | P | single fertilization |
Sequences
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1e7k.pdb1.pdb:
[
download sequences in FASTA format
]
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A (protein):
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C (rna):
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1e7k.pdb2.pdb:
[
download sequences in FASTA format
]
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B (protein):
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D (rna):
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