General information
PDB ID 1E7K
Title CRYSTAL STRUCTURE OF THE SPLICEOSOMAL 15.5KD PROTEIN BOUND TO A U4 SNRNA FRAGMENT
PDB header RNA-BINDING PROTEIN
Date 2000-08-29
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.9
Kind rna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1e7k.pdb AB CD 0
Biounits:
1e7k.pdb1.pdb A C 1
1e7k.pdb2.pdb B D 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L7Ae Domain P55769_20-114 2.2e-25 1 CL0101 A 20 114 C   
Ribosomal_L7Ae Domain P55769_20-114 2.1e-25 1 CL0101 B 20 114 D   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Bacillus chorismate mutase-like
    Superfamily: L30e-like
      Family: L30e/L7ae ribosomal proteins
Spliceosomal 15.5kd protein A N/A N/A C -
Class: Alpha and beta proteins (a+b)
  Fold: Bacillus chorismate mutase-like
    Superfamily: L30e-like
      Family: L30e/L7ae ribosomal proteins
Spliceosomal 15.5kd protein B N/A N/A D -
GO terms
Protein chains: GO type: GO description:
A/B=1-128 C box C/D snoRNP complex
A/B=1-128 C dense fibrillar component
A/B=1-128 C nucleolus
A/B=1-128 C nucleoplasm
A/B=1-128 C nucleus
A/B=1-128 C precatalytic spliceosome
A/B=1-128 C protein-containing complex
A/B=1-128 C small-subunit processome
A/B=1-128 C U2-type precatalytic spliceosome
A/B=1-128 C U4/U6 x U5 tri-snRNP complex
A/B=1-128 C U4atac snRNP
A/B=1-128 F ATPase binding
A/B=1-128 F box C/D snoRNA binding
A/B=1-128 F RNA binding
A/B=1-128 F U3 snoRNA binding
A/B=1-128 F U4 snRNA binding
A/B=1-128 F U4atac snRNA binding
A/B=1-128 P box C/D snoRNP assembly
A/B=1-128 P maturation of LSU-rRNA
A/B=1-128 P maturation of SSU-rRNA
A/B=1-128 P mRNA splicing, via spliceosome
A/B=1-128 P rRNA processing
A/B=1-128 P single fertilization
Sequences
Download file with secondary structure created by Stride  
1e7k.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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C (rna): 
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1e7k.pdb2.pdb:   [ download sequences in FASTA format ]
B (protein): 
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D (rna): 
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