General information
PDB ID 1E8O
Title CORE OF THE ALU DOMAIN OF THE MAMMALIAN SRP
PDB header ALU RIBONUCLEOPROTEIN PARTICLE
Date 2000-09-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.2
Kind rna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1e8o.pdb ABCD E 0
Biounits:
1e8o.pdb1.pdb ABCD E 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
SRP9-21 Domain P49458_5-73 0.0000000000062 1 CL0623 A 4 73 E   
SRP14 Domain P37108_4-94 1.6e-22 1 CL0623 B 4 94 E   
SRP9-21 Domain P49458_5-73 0.000000000011 1 CL0623 C 5 73 E   
SRP14 Domain P37108_4-94 1.2e-22 1 CL0623 D 4 94 E   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Signal recognition particle alu RNA binding heterodimer, SRP9/14
    Superfamily: Signal recognition particle alu RNA binding heterodimer, SRP9/14
      Family: Signal recognition particle alu RNA binding heterodimer, SRP9/14
Signal recognition particle 9KDa protein, SRP9 A N/A N/A E -
Class: Alpha and beta proteins (a+b)
  Fold: Signal recognition particle alu RNA binding heterodimer, SRP9/14
    Superfamily: Signal recognition particle alu RNA binding heterodimer, SRP9/14
      Family: Signal recognition particle alu RNA binding heterodimer, SRP9/14
Signal recognition particle 9KDa protein, SRP9 C N/A N/A E -
Class: Alpha and beta proteins (a+b)
  Fold: Signal recognition particle alu RNA binding heterodimer, SRP9/14
    Superfamily: Signal recognition particle alu RNA binding heterodimer, SRP9/14
      Family: Signal recognition particle alu RNA binding heterodimer, SRP9/14
Signal recognition particle 14KDa protein, SRP14 B N/A N/A E -
Class: Alpha and beta proteins (a+b)
  Fold: Signal recognition particle alu RNA binding heterodimer, SRP9/14
    Superfamily: Signal recognition particle alu RNA binding heterodimer, SRP9/14
      Family: Signal recognition particle alu RNA binding heterodimer, SRP9/14
Signal recognition particle 14KDa protein, SRP14 D N/A N/A E -
GO terms
Protein chains: GO type: GO description:
A/C=2-86 C signal recognition particle receptor complex
A/C=2-86 F signal recognition particle binding
A/C=2-86 F RNA binding
B/D=2-107 C signal recognition particle, endoplasmic reticulum targeting
B/D=2-107 C cytosol
B/D=2-107 F 7S RNA binding
B/D=2-107 F endoplasmic reticulum signal peptide binding
B/D=2-107 P response to drug
B/D=2-107 P SRP-dependent cotranslational protein targeting to membrane
B/D=2-107 P negative regulation of translational elongation
B/D=2-107 P translation
Sequences
Download file with secondary structure created by Stride  
1e8o.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (rna): 
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