General information
PDB ID 1EG0
Title FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOME
PDB header RIBOSOME
Date 2000-02-11
Experimental method ELECTRON MICROSCOPY
Resolution (A) 11.5
Kind rna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1eg0.pdb ABCDEFGHNJK ILMO 0
Biounits:
1eg0.pdb1.pdb ABCDEFGHNJK ILMO 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
S4 Domain P81288_92-139 1.4e-21 1 CL0492 A 51 98   
Ribosomal_S5 Domain P02357_11-75 3.2e-33 1 CL0196 B 8 72   
Ribosomal_S5_C Domain P02357_86-148 1.9e-28 1 CL0329 B 83 145   
Ribosomal_S6 Domain Q5SLP8_3-92 4.1e-21 1 No_clan C 3 92   
Ribosomal_S7 Domain P17291_12-146 4.6e-59 1 No_clan D 1 135   
Ribosomal_S8 Domain A0A0M9AFS9_4-138 1.3e-49 1 No_clan E 2 136   
Ribosomal_S15 Domain Q5SJ76_8-88 5.1e-39 1 CL0600 F 7 87   
Ribosomal_S17 Domain P23828_12-79 1.6e-33 1 CL0021 G 7 74   
Ribosomal_L6 Domain P02391_11-82 9.8e-27 1 No_clan J 4 75   
Ribosomal_L6 Domain P02391_90-165 8.9e-22 1 No_clan J 83 158   
Ribosomal_L11_N Domain P29395_8-66 2.6e-31 1 No_clan K 2 59   
Ribosomal_L11 Domain P29395_71-139 4.2e-29 1 No_clan K 64 132   
Ribosomal_L1 Domain P27150_29-221 1.9e-54 1 No_clan N 20 212   
Ribosomal_S4 Family P81288_43-91 2.7e-17 1 CL0492 A 1 50   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex A N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex B N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex C N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex D N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex E N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex F N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex G N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex H N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex J N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex K N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Ribosome complexes
70S ribosome functional complex N N/A N/A -
GO terms
Protein chains: GO type: GO description:
A=43-200 C small ribosomal subunit
A=43-200 P response to antibiotic
G=2-85 C ribosome
G=2-85 F structural constituent of ribosome
G=2-85 F rRNA binding
G=2-85 P translation
N=1-229 C large ribosomal subunit
N=1-229 F tRNA binding
N=1-229 P regulation of translation
Sequences
Download file with secondary structure created by Stride  
1eg0.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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C (protein): 
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D (protein): 
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E (protein): 
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F (protein): 
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G (protein): 
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H (protein): 
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J (protein): 
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K (protein): 
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N (protein): 
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I (rna): 
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L (rna): 
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M (rna): 
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O (rna): 
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