General information
PDB ID 1G2D
Title STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (CLONE #2)
PDB header TRANSCRIPTION/DNA
Date 2000-10-18
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1g2d.pdb CF ABDE 0
Biounits:
1g2d.pdb1.pdb C AB 1
1g2d.pdb2.pdb F DE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
zf-H2C2_2 Domain 0.00000000087 0 CL0361 C 149 174 AB
zf-H2C2_2 Domain 0.00000021 0 CL0361 C 121 146 AB
zf-H2C2_2 Domain 0.00000000085 0 CL0361 F 249 274 DE
zf-H2C2_2 Domain 0.0000002 0 CL0361 F 221 246 DE
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Designed proteins
  Fold: Zinc finger design
    Superfamily: Zinc finger design
      Family: Zinc finger design
TATA box-binding zinc finger, TATAZF C N/A N/A AB  H-Bb H-Mj S-Mj L-Bb L-Mj 
Class: Designed proteins
  Fold: Zinc finger design
    Superfamily: Zinc finger design
      Family: Zinc finger design
TATA box-binding zinc finger, TATAZF F N/A N/A DE  H-Bb H-Mj S-Mj L-Bb L-Mj 
GO terms
Protein chains: GO type: GO description:
C/F=333-421 C nucleus
C/F=333-421 C cytoplasm
C/F=333-421 F transcription regulatory region DNA binding
C/F=333-421 F double-stranded DNA binding
C/F=333-421 F transcription regulatory region sequence-specific DNA binding
C/F=333-421 F zinc ion binding
C/F=333-421 F RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity
C/F=333-421 P cellular response to heparin
C/F=333-421 P T cell differentiation
C/F=333-421 P cellular response to mycophenolic acid
C/F=333-421 P cellular response to gamma radiation
C/F=333-421 P negative regulation of transcription from RNA polymerase II promoter
C/F=333-421 P positive regulation of glomerular metanephric mesangial cell proliferation
C/F=333-421 P negative regulation of canonical Wnt receptor signaling pathway
C/F=333-421 P BMP signaling pathway
C/F=333-421 P positive regulation of transcription from RNA polymerase II promoter
C/F=333-421 P response to glucose stimulus
C/F=333-421 P response to insulin stimulus
C/F=333-421 P regulation of protein sumoylation
C/F=333-421 P glomerular mesangial cell proliferation
C/F=333-421 P interleukin-1-mediated signaling pathway
C/F=333-421 P regulation of long-term neuronal synaptic plasticity
C/F=333-421 P learning or memory
Sequences
Download file with secondary structure created by Stride  
1g2d.pdb1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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C (protein): 
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1g2d.pdb2.pdb:   [ download sequences in FASTA format ]
D (dna): 
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E (dna): 
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F (protein): 
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