General information
PDB ID 1H38
Title STRUCTURE OF A T7 RNA POLYMERASE ELONGATION COMPLEX AT 2.9A RESOLUTION
PDB header TRANSFERASE
Date 2002-08-24
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.9
Kind hybrid
Organism BACTERIOPHAGE T7
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1h38.pdb ABCD EGHJKMNP FILO 0
Biounits:
1h38.pdb1.pdb A EG F 1
1h38.pdb2.pdb B HJ I 1
1h38.pdb3.pdb C KM L 1
1h38.pdb4.pdb D NP O 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RPOL_N Domain P00573_35-325 5.8e-33 1 No_clan A 35 325 EFG   
RPOL_N Domain P00573_35-325 5.8e-33 1 No_clan B 35 325 HI   
RPOL_N Domain P00573_35-325 5.8e-33 1 No_clan C 35 325 KL   
RPOL_N Domain P00573_35-325 5.8e-33 1 No_clan D 35 325 N   
RNA_pol Family P00573_450-883 2.3e-105 1 No_clan A 450 883 EFG   
RNA_pol Family P00573_450-883 2.3e-105 1 No_clan B 450 883 HIJ   
RNA_pol Family P00573_450-883 2.3e-105 1 No_clan C 450 883 KLM   
RNA_pol Family P00573_450-883 2.3e-105 1 No_clan D 450 883 NOP   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: T7 RNA polymerase
T7 RNA polymerase A N/A N/A EFG  H-Bb H-Mj H-Mn L-Bb 
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: T7 RNA polymerase
T7 RNA polymerase B N/A N/A HIJ  H-Bb H-Mj H-Mn L-Bb 
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: T7 RNA polymerase
T7 RNA polymerase C N/A N/A KLM  H-Bb H-Mj H-Mn L-Bb 
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: T7 RNA polymerase
T7 RNA polymerase D N/A N/A NOP  H-Bb H-Mj H-Mn L-Bb 
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-883 F DNA binding
A/B/C/D=1-883 F DNA-directed RNA polymerase activity
A/B/C/D=1-883 P transcription, DNA-dependent
Sequences
Download file with secondary structure created by Stride  
1h38.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
Click "SHOW" for view sequence
G (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
F (rna): 
Click "SHOW" for view sequence
1h38.pdb2.pdb:   [ download sequences in FASTA format ]
H (dna): 
Click "SHOW" for view sequence
J (dna): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
I (rna): 
Click "SHOW" for view sequence
1h38.pdb3.pdb:   [ download sequences in FASTA format ]
K (dna): 
Click "SHOW" for view sequence
M (dna): 
Click "SHOW" for view sequence
C (protein): 
Click "SHOW" for view sequence
L (rna): 
Click "SHOW" for view sequence
1h38.pdb4.pdb:   [ download sequences in FASTA format ]
N (dna): 
Click "SHOW" for view sequence
P (dna): 
Click "SHOW" for view sequence
D (protein): 
Click "SHOW" for view sequence
O (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text