General information
PDB ID 1H4S
Title PROLYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNAPRO(CGG) AND A PROLYL-ADENYLATE ANALOGUE
PDB header AMINOACYL-TRNA SYNTHETASE
Date 2001-05-14
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.85
Kind rna
Organism THERMUS THERMOPHILUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1h4s.pdb AB T 0
Biounits:
1h4s.pdb1.pdb AB T 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
tRNA-synt_2b Domain Q5SM28_96-273 2.9e-19 1 CL0040 A 96 273 T   
ProRS-C_1 Domain Q5SM28_410-477 7.2e-18 1 No_clan A 410 477   
HGTP_anticodon Domain Q5SM28_289-384 3.2e-17 1 CL0458 A 289 384   
tRNA-synt_2b Domain Q5SM28_96-273 2.9e-19 1 CL0040 B 96 273   
ProRS-C_1 Domain Q5SM28_410-477 7.2e-18 1 No_clan B 410 477   
HGTP_anticodon Domain Q5SM28_289-384 3.2e-17 1 CL0458 B 289 384 T   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: Anticodon-binding domain-like
    Superfamily: Class II aaRS ABD-related
      Family: Anticodon-binding domain of Class II aaRS
Prolyl-tRNA synthetase (ProRS) domain A 277 403 -
Class: Alpha and beta proteins (a+b)
  Fold: Class II aaRS and biotin synthetases
    Superfamily: Class II aaRS and biotin synthetases
      Family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
Prolyl-tRNA synthetase (ProRS) A 5 276 T -
Class: Alpha and beta proteins (a+b)
  Fold: IF3-like
    Superfamily: C-terminal domain of ProRS
      Family: C-terminal domain of ProRS
C-terminal domain of ProRS A 404 477 -
Class: Alpha and beta proteins (a/b)
  Fold: Anticodon-binding domain-like
    Superfamily: Class II aaRS ABD-related
      Family: Anticodon-binding domain of Class II aaRS
Prolyl-tRNA synthetase (ProRS) domain B 277 403 T -
Class: Alpha and beta proteins (a+b)
  Fold: Class II aaRS and biotin synthetases
    Superfamily: Class II aaRS and biotin synthetases
      Family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
Prolyl-tRNA synthetase (ProRS) B 5 276 T -
Class: Alpha and beta proteins (a+b)
  Fold: IF3-like
    Superfamily: C-terminal domain of ProRS
      Family: C-terminal domain of ProRS
C-terminal domain of ProRS B 404 477 -
GO terms
Protein chains: GO type: GO description:
A/B=1-477 C cytoplasm
A/B=1-477 F proline-tRNA ligase activity
A/B=1-477 F metal ion binding
A/B=1-477 F ATP binding
A/B=1-477 P prolyl-tRNA aminoacylation
Sequences
Download file with secondary structure created by Stride  
1h4s.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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T (rna): 
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