General information
PDB ID 1H9T
Title FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
PDB header TRANSCRIPTIONAL REGULATION
Date 2001-03-19
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.25
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1h9t.pdb AB XY 0
Biounits:
1h9t.pdb1.pdb AB XY 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
GntR Domain P0A8V6_8-71 6.3e-20 1 CL0123 A 8 71 XY  H-Bb H-Mj L-Bb L-Mj L-Mn 
GntR Domain P0A8V6_8-71 6e-20 1 CL0123 B 8 71 XY  H-Bb H-Mj L-Bb L-Mj L-Mn 
FadR_C Family P0A8V6_72-235 4.2e-72 1 CL0388 A 72 237   
FadR_C Family P0A8V6_72-230 6.8e-72 1 CL0388 B 72 230   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: GntR-like transcriptional regulators
Fatty acid responsive transcription factor FadR, N-terminal domain A 5 78 XY  H-Bb H-Mj L-Bb L-Mj L-Mn 
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: GntR-like transcriptional regulators
Fatty acid responsive transcription factor FadR, N-terminal domain B 5 78 XY  H-Bb H-Mj L-Bb L-Mj L-Mn 
Class: All alpha proteins
  Fold: GntR ligand-binding domain-like
    Superfamily: GntR ligand-binding domain-like
      Family: GntR ligand-binding domain-like
Fatty acid responsive transcription factor FadR, C-terminal domain A 79 239 -
Class: All alpha proteins
  Fold: GntR ligand-binding domain-like
    Superfamily: GntR ligand-binding domain-like
      Family: GntR ligand-binding domain-like
Fatty acid responsive transcription factor FadR, C-terminal domain B 79 230 -
GO terms
Protein chains: GO type: GO description:
A/B=1-239 C cytosol
A/B=1-239 F DNA binding
A/B=1-239 F DNA-binding transcription factor activity
A/B=1-239 F fatty-acyl-CoA binding
A/B=1-239 P fatty acid oxidation
A/B=1-239 P negative regulation of transcription, DNA-templated
A/B=1-239 P positive regulation of fatty acid biosynthetic process
A/B=1-239 P positive regulation of transcription, DNA-templated
A/B=1-239 P regulation of fatty acid metabolic process
Sequences
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1h9t.pdb1.pdb:   [ download sequences in FASTA format ]
X (dna): 
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Y (dna): 
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A (protein): 
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B (protein): 
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