General information
PDB ID 1HUZ
Title CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCP
PDB header TRANSFERASE/DNA
Date 2001-01-04
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.6
Kind dna
Organism RATTUS NORVEGICUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1huz.pdb AB TPCD 0
Biounits:
1huz.pdb1.pdb A TP 1
1huz.pdb2.pdb B CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_B_palm Domain P06766_149-262 3.2e-40 1 CL0260 A 149 262 PT   
DNA_pol_lambd_f Domain P06766_98-147 1.3e-19 1 CL0198 A 98 147 PT   
HHH_8 Domain P06766_12-78 5.6e-18 1 CL0198 A 12 78   
DNA_pol_B_palm Domain P06766_149-262 3.2e-40 1 CL0260 B 149 262 CD   
DNA_pol_lambd_f Domain P06766_98-147 1.3e-19 1 CL0198 B 98 147 DC   
HHH_8 Domain P06766_12-78 5.6e-18 1 CL0198 B 12 78   
DNA_pol_B_thumb Family P06766_268-334 4.2e-17 1 No_clan A 268 334 PT   
DNA_pol_B_thumb Family P06766_268-334 4.2e-17 1 No_clan B 268 334 CD   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: DNA polymerase beta, N-terminal domain-like
      Family: DNA polymerase beta, N-terminal domain-like
DNA polymerase beta, N-terminal (8 kD)-domain A 10 91 -
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: DNA polymerase beta, N-terminal domain-like
      Family: DNA polymerase beta, N-terminal domain-like
DNA polymerase beta, N-terminal (8 kD)-domain B 10 91 -
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: PsbU/PolX domain-like
      Family: DNA polymerase beta-like, second domain
DNA polymerase beta A 92 148 PT -
Class: Alpha and beta proteins (a+b)
  Fold: Nucleotidyltransferase
    Superfamily: Nucleotidyltransferase
      Family: DNA polymerase beta-like
DNA polymerase beta, catalytic (31 kD) fragment A 149 334 PT -
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: PsbU/PolX domain-like
      Family: DNA polymerase beta-like, second domain
DNA polymerase beta B 92 148 DC -
Class: Alpha and beta proteins (a+b)
  Fold: Nucleotidyltransferase
    Superfamily: Nucleotidyltransferase
      Family: DNA polymerase beta-like
DNA polymerase beta, catalytic (31 kD) fragment B 149 334 CD -
GO terms
Protein chains: GO type: GO description:
A/B=1-335 C cytoplasm
A/B=1-335 C spindle microtubule
A/B=1-335 C nucleus
A/B=1-335 F lyase activity
A/B=1-335 F DNA-directed DNA polymerase activity
A/B=1-335 F metal ion binding
A/B=1-335 F damaged DNA binding
A/B=1-335 P DNA replication
A/B=1-335 P cell death
A/B=1-335 P pyrimidine dimer repair
A/B=1-335 P anti-apoptosis
A/B=1-335 P base-excision repair
A/B=1-335 P response to ethanol
Sequences
Download file with secondary structure created by Stride  
1huz.pdb1.pdb:   [ download sequences in FASTA format ]
P (dna): 
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T (dna): 
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A (protein): 
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1huz.pdb2.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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B (protein): 
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