General information
PDB ID 1I6U
Title RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII
PDB header RIBOSOME
Date 2001-03-05
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.6
Kind rna
Organism METHANOCALDOCOCCUS JANNASCHII
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1i6u.pdb AB CD 0
Biounits:
1i6u.pdb1.pdb A C 1
1i6u.pdb2.pdb B D 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_S8 Domain P54041_5-130 2.7e-22 1 No_clan A 5 130 C   
Ribosomal_S8 Domain P54041_5-130 2.5e-22 1 No_clan B 5 130 D   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Ribosomal protein S8
    Superfamily: Ribosomal protein S8
      Family: Ribosomal protein S8
Ribosomal protein S8 A N/A N/A C -
Class: Alpha and beta proteins (a+b)
  Fold: Ribosomal protein S8
    Superfamily: Ribosomal protein S8
      Family: Ribosomal protein S8
Ribosomal protein S8 B N/A N/A D -
GO terms
Protein chains: GO type: GO description:
A/B=1-130 C ribosome
A/B=1-130 F structural constituent of ribosome
A/B=1-130 F rRNA binding
A/B=1-130 P translation
Sequences
Download file with secondary structure created by Stride  
1i6u.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
Click "SHOW" for view sequence
C (rna): 
Click "SHOW" for view sequence
1i6u.pdb2.pdb:   [ download sequences in FASTA format ]
B (protein): 
Click "SHOW" for view sequence
D (rna): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text