General information
PDB ID 1IV6
Title SOLUTION STRUCTURE OF THE DNA COMPLEX OF HUMAN TRF1
PDB header DNA BINDING PROTEIN/DNA
Date 2002-03-14
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1iv6.pdb A BC 20
NMR models:
1iv6.MDL1.pdb A BC 1
1iv6.MDL2.pdb A BC 1
1iv6.MDL3.pdb A BC 1
1iv6.MDL4.pdb A BC 1
1iv6.MDL5.pdb A BC 1
1iv6.MDL6.pdb A BC 1
1iv6.MDL7.pdb A BC 1
1iv6.MDL8.pdb A BC 1
1iv6.MDL9.pdb A BC 1
1iv6.MDL10.pdb A BC 1
1iv6.MDL11.pdb A BC 1
1iv6.MDL12.pdb A BC 1
1iv6.MDL13.pdb A BC 1
1iv6.MDL14.pdb A BC 1
1iv6.MDL15.pdb A BC 1
1iv6.MDL16.pdb A BC 1
1iv6.MDL17.pdb A BC 1
1iv6.MDL18.pdb A BC 1
1iv6.MDL19.pdb A BC 1
1iv6.MDL20.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Myb_DNA-binding Domain P54274_380-428 2.8e-12 1 CL0123 A 380 428 BC  H-Bb H-Mj L-Bb L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: DNA-binding domain of telomeric protein
DNA-binding domain of human telomeric protein, hTRF1 A N/A N/A BC -
GO terms
Protein chains: GO type: GO description:
A=371-439 C chromosome, telomeric region
A=371-439 C cytoplasm
A=371-439 C fibrillar center
A=371-439 C nuclear body
A=371-439 C nuclear chromosome, telomeric region
A=371-439 C nuclear telomere cap complex
A=371-439 C nucleolus
A=371-439 C nucleoplasm
A=371-439 C nucleus
A=371-439 C shelterin complex
A=371-439 C spindle
A=371-439 F ankyrin repeat binding
A=371-439 F DNA binding
A=371-439 F DNA binding, bending
A=371-439 F double-stranded telomeric DNA binding
A=371-439 F G-rich strand telomeric DNA binding
A=371-439 F identical protein binding
A=371-439 F microtubule binding
A=371-439 F protein C-terminus binding
A=371-439 F protein homodimerization activity
A=371-439 F telomeric DNA binding
A=371-439 P cell division
A=371-439 P meiotic telomere clustering
A=371-439 P negative regulation of DNA replication
A=371-439 P negative regulation of establishment of protein localization to telomere
A=371-439 P negative regulation of establishment of protein-containing complex localization to telomere
A=371-439 P negative regulation of establishment of RNA localization to telomere
A=371-439 P negative regulation of exonuclease activity
A=371-439 P negative regulation of telomerase activity
A=371-439 P negative regulation of telomere maintenance via semi-conservative replication
A=371-439 P negative regulation of telomere maintenance via telomerase
A=371-439 P negative regulation of telomere maintenance via telomere lengthening
A=371-439 P negative regulation of telomeric D-loop disassembly
A=371-439 P positive regulation of shelterin complex assembly
A=371-439 P response to drug
A=371-439 P t-circle formation
A=371-439 P telomere capping
A=371-439 P telomere maintenance
A=371-439 P telomere maintenance via telomerase
A=371-439 P telomeric D-loop disassembly
Sequences
Download file with secondary structure created by Stride  
1iv6.MDL1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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