General information
PDB ID 1J47
Title 3D SOLUTION NMR STRUCTURE OF THE M9I MUTANT OF THE HMG-BOX DOMAIN OF THE HUMAN MALE SEX DETERMINING FACTOR SRY COMPLEXED TO DNA
PDB header TRANSCRIPTION/DNA
Date 2001-07-23
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism HOMO SAPIENS
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CATH PDBsum HSSP PDBePISA UniProt
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Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1j47.pdb A BC 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
HMG_box Domain Q05066_60-128 3.7e-26 1 CL0114 A 5 73 BC  H-Bb H-Mn L-Bb L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: HMG-box
    Superfamily: HMG-box
      Family: HMG-box
SRY A N/A N/A BC  H-Bb H-Mn L-Bb L-Mn 
GO terms
Protein chains: GO type: GO description:
A=57-140 C cytoplasm
A=57-140 C nuclear chromatin
A=57-140 C nuclear speck
A=57-140 C nucleoplasm
A=57-140 C nucleus
A=57-140 C transcription regulator complex
A=57-140 F calmodulin binding
A=57-140 F DNA binding
A=57-140 F DNA-binding transcription factor activity, RNA polymerase II-specific
A=57-140 F transcription factor binding
A=57-140 P anatomical structure morphogenesis
A=57-140 P cell differentiation
A=57-140 P male sex determination
A=57-140 P negative regulation of transcription by RNA polymerase II
A=57-140 P positive regulation of gene expression
A=57-140 P positive regulation of male gonad development
A=57-140 P positive regulation of transcription by RNA polymerase II
A=57-140 P positive regulation of transcription, DNA-templated
A=57-140 P regulation of transcription, DNA-templated
A=57-140 P sex differentiation
Sequences
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pdb1j47.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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