NPIDB: 1JWL structure

General information

PDB ID

1JWL

Title

STRUCTURE OF THE DIMERIC LAC REPRESSOR/OPERATOR O1/ONPF COMPLEX

PDB header

TRANSCRIPTION/DNA

Date

2001-09-04

Experimental method

X-RAY DIFFRACTION

Resolution (A)

Kind

dna

Organism

ESCHERICHIA COLI


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PDB	PDBe	MMDB	Jena	OCA
CATH	PDBsum	HSSP	PDBePISA	UniProt
ProteopediA	BIPA

Composition of PDB entry and biounits
File:	Protein chains:	DNA chains:	RNA chains:	No. of models:	Action:

PDB entry:

pdb1jwl.pdb	ABC	DE		0

Biounits:

1jwl.pdb1.pdb	AB	DE		1
1jwl.pdb2.pdb	CA			0

Pfam domains
Name:	Type:	Domain:	E-value:	Significance:	Clan:	Prot. chain:	Start res.:	End res.:	Nuc. chains:	Int. mode:	Action:

Peripla_BP_3	Domain	P03023_171-329	5.3e-33	1	CL0144	A	171	329
Peripla_BP_3	Domain		9e-33	1	CL0144	A	171	329
LacI	Domain	P03023_5-50	1.7e-22	1	CL0123	A	5	50	D
Peripla_BP_3	Domain	P03023_171-329	9e-33	1	CL0144	B	171	329
LacI	Domain	P03023_5-50	1.7e-22	1	CL0123	B	5	50	DE
Peripla_BP_3	Domain	P03023_171-329	5.3e-33	1	CL0144	C	171	329

SCOP domains
Classification:	Protein:	Prot. chain:	Start res.:	End res.:	Nuc. chains:	Int. mode:	Action:

Class: All alpha proteins Fold: lambda repressor-like DNA-binding domains Superfamily: lambda repressor-like DNA-binding domains Family: GalR/LacI-like bacterial regulator	Lac repressor (LacR), N-terminal domain	A	2	60	D	L-Bb
Class: All alpha proteins Fold: lambda repressor-like DNA-binding domains Superfamily: lambda repressor-like DNA-binding domains Family: GalR/LacI-like bacterial regulator	Lac repressor (LacR), N-terminal domain	A	2	60	D	-
Class: All alpha proteins Fold: lambda repressor-like DNA-binding domains Superfamily: lambda repressor-like DNA-binding domains Family: GalR/LacI-like bacterial regulator	Lac repressor (LacR), N-terminal domain	A	2	60		L-Bb
Class: All alpha proteins Fold: lambda repressor-like DNA-binding domains Superfamily: lambda repressor-like DNA-binding domains Family: GalR/LacI-like bacterial regulator	Lac repressor (LacR), N-terminal domain	A	2	60		-
Class: Alpha and beta proteins (a/b) Fold: Periplasmic binding protein-like I Superfamily: Periplasmic binding protein-like I Family: L-arabinose binding protein-like	Lac-repressor (lacR) core (C-terminal domain)	A	61	330		-
Class: Alpha and beta proteins (a/b) Fold: Periplasmic binding protein-like I Superfamily: Periplasmic binding protein-like I Family: L-arabinose binding protein-like	Lac-repressor (lacR) core (C-terminal domain)	A	61	330		-
Class: All alpha proteins Fold: lambda repressor-like DNA-binding domains Superfamily: lambda repressor-like DNA-binding domains Family: GalR/LacI-like bacterial regulator	Lac repressor (LacR), N-terminal domain	B	2	60	DE	H-Mn L-Bb
Class: Alpha and beta proteins (a/b) Fold: Periplasmic binding protein-like I Superfamily: Periplasmic binding protein-like I Family: L-arabinose binding protein-like	Lac-repressor (lacR) core (C-terminal domain)	B	61	330		-
Class: Alpha and beta proteins (a/b) Fold: Periplasmic binding protein-like I Superfamily: Periplasmic binding protein-like I Family: L-arabinose binding protein-like	Lac-repressor (lacR) core (C-terminal domain)	C	N/A	N/A		-

GO terms
Protein chains:	GO type:	GO description:
A/B/C=1-333	C	cytosol
A/B/C=1-333	F	DNA binding
A/B/C=1-333	F	sequence-specific DNA binding transcription factor activity
A/B/C=1-333	P	transcription, DNA-dependent

Sequences

Download file with secondary structure created by Stride

1jwl.pdb1.pdb: [ download sequences in FASTA format ]

D (dna):