General information
PDB ID 1K79
Title ETS-1(331-440)+GGAA DUPLEX
PDB header TRANSCRIPTION/DNA
Date 2001-10-18
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.4
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1k79.pdb AD BCEF 0
Biounits:
1k79.pdb1.pdb A BC 1
1k79.pdb2.pdb D EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ets Domain P27577_336-415 2.7e-38 1 CL0123 A 336 415 BC  H-Bb H-Mj S-Bb L-Bb 
Ets Domain P27577_336-415 2.7e-38 1 CL0123 D 336 415 EF  H-Bb H-Mj S-Bb L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: ets domain
ETS-1 transcription factor, residues 331-440 A N/A N/A BC  H-Bb H-Mj S-Bb L-Bb 
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: "Winged helix" DNA-binding domain
      Family: ets domain
ETS-1 transcription factor, residues 331-440 D N/A N/A EF  H-Bb H-Mj S-Bb L-Bb 
GO terms
Protein chains: GO type: GO description:
A/D=331-440 C transcription factor complex
A/D=331-440 F sequence-specific DNA binding
A/D=331-440 F sequence-specific DNA binding transcription factor activity
A/D=331-440 P response to mechanical stimulus
A/D=331-440 P estrous cycle phase
A/D=331-440 P response to interleukin-1
A/D=331-440 P hypothalamus development
A/D=331-440 P transcription from RNA polymerase II promoter
A/D=331-440 P positive regulation of cell migration
A/D=331-440 P PML body organization
A/D=331-440 P angiogenesis involved in wound healing
A/D=331-440 P response to hypoxia
A/D=331-440 P induction of apoptosis
A/D=331-440 P positive regulation of cell proliferation
A/D=331-440 P cellular response to hydrogen peroxide
A/D=331-440 P regulation of extracellular matrix disassembly
A/D=331-440 P female pregnancy
A/D=331-440 P pituitary gland development
A/D=331-440 P positive regulation of transcription from RNA polymerase II promoter
A/D=331-440 P positive regulation of erythrocyte differentiation
A/D=331-440 P negative regulation of cell cycle
A/D=331-440 P response to antibiotic
A/D=331-440 P response to estradiol stimulus
A/D=331-440 P positive regulation of angiogenesis
A/D=331-440 P response to laminar fluid shear stress
A/D=331-440 P cell motility
A/D=331-440 P anti-apoptosis
Sequences
Download file with secondary structure created by Stride  
1k79.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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1k79.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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D (protein): 
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