General information
PDB ID 1KQQ
Title SOLUTION STRUCTURE OF THE DEAD RINGER ARID-DNA COMPLEX
PDB header TRANSCRIPTION/DNA
Date 2002-01-07
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism DROSOPHILA MELANOGASTER
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1kqq.pdb A BC 20
NMR models:
1kqq.MDL1.pdb A BC 1
1kqq.MDL2.pdb A BC 1
1kqq.MDL3.pdb A BC 1
1kqq.MDL4.pdb A BC 1
1kqq.MDL5.pdb A BC 1
1kqq.MDL6.pdb A BC 1
1kqq.MDL7.pdb A BC 1
1kqq.MDL8.pdb A BC 1
1kqq.MDL9.pdb A BC 1
1kqq.MDL10.pdb A BC 1
1kqq.MDL11.pdb A BC 1
1kqq.MDL12.pdb A BC 1
1kqq.MDL13.pdb A BC 1
1kqq.MDL14.pdb A BC 1
1kqq.MDL15.pdb A BC 1
1kqq.MDL16.pdb A BC 1
1kqq.MDL17.pdb A BC 1
1kqq.MDL18.pdb A BC 1
1kqq.MDL19.pdb A BC 1
1kqq.MDL20.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
ARID Domain Q24573_295-381 6e-21 1 CL0123 A 24 110 BC  H-Bb H-Mj L-Bb L-Mj 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: ARID-like
      Family: ARID domain
DNA-binding domain from the dead ringer protein A N/A N/A BC -
GO terms
Protein chains: GO type: GO description:
A=274-410 C nucleus
A=274-410 F DNA binding
A=274-410 F DNA-binding transcription activator activity, RNA polymerase II-specific
A=274-410 F repressing transcription factor binding
A=274-410 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
A=274-410 F transcription regulatory region sequence-specific DNA binding
A=274-410 P anterior/posterior pattern specification
A=274-410 P axon guidance
A=274-410 P dendrite morphogenesis
A=274-410 P embryonic pattern specification
A=274-410 P gliogenesis
A=274-410 P male courtship behavior
A=274-410 P muscle organ development
A=274-410 P negative regulation of transcription by RNA polymerase II
A=274-410 P oogenesis
A=274-410 P positive regulation of transcription, DNA-templated
A=274-410 P regulation of female receptivity
A=274-410 P salivary gland development
Sequences
Download file with secondary structure created by Stride  
1kqq.MDL1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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