General information
PDB ID 1L3U
Title CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 11 BASE PAIRS OF DUPLEX DNA FOLLOWING ADDITION OF A DTTP AND A DATP RESIDUE.
PDB header TRANSFERASE/DNA
Date 2002-03-01
Experimental method X-RAY DIFFRACTION
Resolution (A) 1.8
Kind dna
Organism GEOBACILLUS STEAROTHERMOPHILUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1l3u.pdb A BC 0
Biounits:
1l3u.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_pol_A Family P52026_497-874 1.2e-163 1 No_clan A 497 874 BC  H-Bb H-Mj H-Mn S-Bb L-Bb L-Mj L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Ribonuclease H-like
      Family: DnaQ-like 3'-5' exonuclease
Exonuclease domain of prokaryotic DNA polymerase A 297 468 B  H-Bb 
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: DNA polymerase I
DNA polymerase I (Klenow fragment) A 469 876 BC -
GO terms
Protein chains: GO type: GO description:
A=304-876 C intracellular
A=304-876 F 5'-3' exonuclease activity
A=304-876 F DNA binding
A=304-876 F 3'-5' exonuclease activity
A=304-876 F DNA-directed DNA polymerase activity
A=304-876 P nucleic acid phosphodiester bond hydrolysis
A=304-876 P DNA replication
A=304-876 P DNA repair
Sequences
Download file with secondary structure created by Stride  
1l3u.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
Click "SHOW" for view sequence
C (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text