General information
PDB ID 1LFU
Title NMR SOLUTION STRUCTURE OF THE EXTENDED PBX HOMEODOMAIN BOUND TO DNA
PDB header TRANSCRIPTION
Date 2002-04-12
Experimental method SOLUTION NMR
Resolution (A) N/A
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1lfu.pdb P AB 20
Biounits:
1lfu.pdb1.pdb P AB 1
NMR models:
1lfu.MDL1.pdb P AB 1
1lfu.MDL2.pdb P AB 1
1lfu.MDL3.pdb P AB 1
1lfu.MDL4.pdb P AB 1
1lfu.MDL5.pdb P AB 1
1lfu.MDL6.pdb P AB 1
1lfu.MDL7.pdb P AB 1
1lfu.MDL8.pdb P AB 1
1lfu.MDL9.pdb P AB 1
1lfu.MDL10.pdb P AB 1
1lfu.MDL11.pdb P AB 1
1lfu.MDL12.pdb P AB 1
1lfu.MDL13.pdb P AB 1
1lfu.MDL14.pdb P AB 1
1lfu.MDL15.pdb P AB 1
1lfu.MDL16.pdb P AB 1
1lfu.MDL17.pdb P AB 1
1lfu.MDL18.pdb P AB 1
1lfu.MDL19.pdb P AB 1
1lfu.MDL20.pdb P AB 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Homeodomain Domain P41778_234-293 1.8e-19 1 CL0123 P 2 58 AB  H-Bb H-Mj L-Bb L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Homeodomain-like
      Family: Homeodomain
pbx1 P N/A N/A AB -
GO terms
Protein chains: GO type: GO description:
P=233-313 C cytoplasm
P=233-313 C nucleoplasm
P=233-313 C nucleus
P=233-313 C RNA polymerase II transcription regulator complex
P=233-313 C transcription regulator complex
P=233-313 F DNA binding
P=233-313 F DNA-binding transcription activator activity, RNA polymerase II-specific
P=233-313 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
P=233-313 F sequence-specific DNA binding
P=233-313 F sequence-specific double-stranded DNA binding
P=233-313 F transcription factor binding
P=233-313 P adrenal gland development
P=233-313 P animal organ morphogenesis
P=233-313 P anterior/posterior pattern specification
P=233-313 P brain development
P=233-313 P branching involved in ureteric bud morphogenesis
P=233-313 P embryonic hemopoiesis
P=233-313 P embryonic limb morphogenesis
P=233-313 P embryonic organ development
P=233-313 P embryonic skeletal system development
P=233-313 P eye development
P=233-313 P negative regulation of DNA-binding transcription factor activity
P=233-313 P negative regulation of neuron differentiation
P=233-313 P neuron development
P=233-313 P positive regulation of cell population proliferation
P=233-313 P positive regulation of G2/M transition of mitotic cell cycle
P=233-313 P positive regulation of transcription by RNA polymerase II
P=233-313 P proximal/distal pattern formation
P=233-313 P regulation of cell population proliferation
P=233-313 P regulation of ossification
P=233-313 P sex differentiation
P=233-313 P spleen development
P=233-313 P steroid biosynthetic process
P=233-313 P thymus development
P=233-313 P urogenital system development
Sequences
Download file with secondary structure created by Stride  
1lfu.MDL1.pdb:   [ download sequences in FASTA format ]
A (dna): 
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B (dna): 
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P (protein): 
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