General information
PDB ID 1LRR
Title CRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNA
PDB header REPLICATION INHIBITOR/DNA
Date 2002-05-15
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.65
Kind dna
Organism ESCHERICHIA COLI
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1lrr.pdb AD BCEF 0
Biounits:
1lrr.pdb1.pdb A BC 1
1lrr.pdb2.pdb D EF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
SeqA Domain P0AFY8_71-180 7.4e-51 1 No_clan A 70 180 BC  H-Bb S-Bb L-Bb L-Mj L-Mn 
SeqA Domain P0AFY8_71-180 7.4e-51 1 No_clan D 70 180 EF  H-Bb S-Bb L-Bb L-Mj 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Replication modulator SeqA, C-terminal DNA-binding domain
    Superfamily: Replication modulator SeqA, C-terminal DNA-binding domain
      Family: Replication modulator SeqA, C-terminal DNA-binding domain
Replication modulator SeqA, C-terminal DNA-binding domain A N/A N/A BC  H-Bb S-Bb L-Bb L-Mn 
Class: Alpha and beta proteins (a+b)
  Fold: Replication modulator SeqA, C-terminal DNA-binding domain
    Superfamily: Replication modulator SeqA, C-terminal DNA-binding domain
      Family: Replication modulator SeqA, C-terminal DNA-binding domain
Replication modulator SeqA, C-terminal DNA-binding domain D N/A N/A EF  H-Bb S-Bb L-Bb L-Mj 
GO terms
Protein chains: GO type: GO description:
A/D=51-181 C cytosol
A/D=51-181 C SeqA-DNA complex
A/D=51-181 F DNA replication origin binding
A/D=51-181 F double-stranded methylated DNA binding
A/D=51-181 F hemi-methylated DNA-binding
A/D=51-181 F identical protein binding
A/D=51-181 P negative regulation of DNA-dependent DNA replication initiation
A/D=51-181 P nucleoid organization
A/D=51-181 P protein homotetramerization
A/D=51-181 P regulation of transcription, DNA-templated
A/D=51-181 P response to radiation
A/D=51-181 P sister chromatid cohesion
Sequences
Download file with secondary structure created by Stride  
1lrr.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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1lrr.pdb2.pdb:   [ download sequences in FASTA format ]
E (dna): 
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F (dna): 
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D (protein): 
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