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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1lws.pdb | A | BC | 0 |
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Biounits: | |||||
1lws.pdb1.pdb | A | BC | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | P17255_284-736 | 3.8e-71 | 1 |
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A | 1 | 453 | BC | H-Bb H-Mj H-Mn S-Bb S-Mj L-Bb L-Mj L-Mn |
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Domain | P17255_585-696 | 4.9e-35 | 1 |
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A | 302 | 413 | BC | S-Bb S-Mj L-Bb L-Mj |
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Domain | P17255_478-579 | 1.1e-08 | 1 |
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A | 195 | 287 | BC | S-Bb L-Bb L-Mj |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
VMA1-derived endonuclease (VDE) PI-SceI | A | 181 | 298 | BC | S-Bb L-Bb L-Mj |
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VMA1-derived endonuclease (VDE) PI-SceI | A | 299 | 415 | BC | S-Bb S-Mj L-Bb L-Mj |
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VMA1-derived endonuclease (VDE) PI-Scei intein | A | 1 | 180 | - |
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VMA1-derived endonuclease (VDE) PI-Scei intein | A | 416 | 454 | - |
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VMA1-derived endonuclease (VDE) PI-Scei intein | A | 1 | 180 | BC | - |
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VMA1-derived endonuclease (VDE) PI-Scei intein | A | 416 | 454 | BC | - |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A=284-737 | C | endomembrane system |
A=284-737 | C | vacuolar proton-transporting V-type ATPase, V1 domain |
A=284-737 | C | fungal-type vacuole membrane |
A=284-737 | F | hydrogen ion transporting ATP synthase activity, rotational mechanism |
A=284-737 | F | endodeoxyribonuclease activity |
A=284-737 | F | DNA binding |
A=284-737 | F | ATP binding |
A=284-737 | F | proton-transporting ATPase activity, rotational mechanism |
A=284-737 | P | cellular protein metabolic process |
A=284-737 | P | ATP hydrolysis coupled proton transport |
A=284-737 | P | intron homing |
A=284-737 | P | intein-mediated protein splicing |
A=284-737 | P | vacuolar acidification |
Sequences
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1lws.pdb1.pdb:
[
download sequences in FASTA format
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B (dna):
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C (dna):
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A (protein):
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