General information
PDB ID 1M5O
Title TRANSITION STATE STABILIZATION BY A CATALYTIC RNA
PDB header TRANSLATION/RNA
Date 2002-07-09
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind rna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1m5o.pdb CF ABDE 0
Biounits:
1m5o.pdb1.pdb C AB 1
1m5o.pdb2.pdb F DE 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RRM_1 Domain P09012_12-83 0.0000000000014 1 CL0221 C 12 83 B   
RRM_1 Domain P09012_12-83 0.0000000000015 1 CL0221 F 12 83 E   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: RNA-binding domain, RBD
      Family: Canonical RBD
Splicesomal U1A protein C N/A N/A B -
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: RNA-binding domain, RBD
      Family: Canonical RBD
Splicesomal U1A protein F N/A N/A E -
GO terms
Protein chains: GO type: GO description:
C/F=1-100 C nucleoplasm
C/F=1-100 C spliceosomal complex
C/F=1-100 F snRNA binding
C/F=1-100 F RNA binding
C/F=1-100 F nucleotide binding
C/F=1-100 P nuclear mRNA splicing, via spliceosome
Sequences
Download file with secondary structure created by Stride  
1m5o.pdb1.pdb:   [ download sequences in FASTA format ]
C (protein): 
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A (rna): 
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B (rna): 
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1m5o.pdb2.pdb:   [ download sequences in FASTA format ]
F (protein): 
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D (rna): 
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E (rna): 
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