General information
PDB ID 1M8X
Title CRYSTAL STRUCTURE OF THE PUMILIO-HOMOLOGY DOMAIN FROM HUMAN PUMILIO1 IN COMPLEX WITH NRE1-14 RNA
PDB header RNA BINDING PROTEIN/RNA
Date 2002-07-26
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind rna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1m8x.pdb AB CD 0
Biounits:
1m8x.pdb1.pdb A C 1
1m8x.pdb2.pdb B D 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PUF Repeat Q14671_1028-1062 0.0000000013 1 CL0020 A 1028 1062 C   
PUF Repeat Q14671_956-990 0.000000012 1 CL0020 A 956 990 C   
PUF Repeat Q14671_992-1026 0.000000019 1 CL0020 A 992 1026 C   
PUF Repeat Q14671_1110-1141 0.00000043 1 CL0020 A 1110 1141 C   
PUF Repeat Q14671_884-916 0.00000079 1 CL0020 A 884 916 C   
PUF Repeat Q14671_1064-1094 0.0000015 1 CL0020 A 1064 1094 C   
PUF Repeat Q14671_920-954 0.0000017 1 CL0020 A 920 954 C   
PUF Repeat Q14671_848-882 0.0000027 1 CL0020 A 848 882   
PUF Repeat Q14671_1028-1062 0.0000000013 1 CL0020 B 1028 1062 D   
PUF Repeat Q14671_956-990 0.000000012 1 CL0020 B 956 990 D   
PUF Repeat Q14671_992-1026 0.000000019 1 CL0020 B 992 1026 D   
PUF Repeat Q14671_1110-1141 0.00000043 1 CL0020 B 1110 1141 D   
PUF Repeat Q14671_884-916 0.00000079 1 CL0020 B 884 916 D   
PUF Repeat Q14671_1064-1094 0.0000015 1 CL0020 B 1064 1094 D   
PUF Repeat Q14671_920-954 0.0000017 1 CL0020 B 920 954 D   
PUF Repeat Q14671_848-882 0.0000027 1 CL0020 B 848 882   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: alpha-alpha superhelix
    Superfamily: ARM repeat
      Family: Pumilio repeat
Pumilio 1 A N/A N/A C -
Class: All alpha proteins
  Fold: alpha-alpha superhelix
    Superfamily: ARM repeat
      Family: Pumilio repeat
Pumilio 1 B N/A N/A D -
GO terms
Protein chains: GO type: GO description:
A/B=828-1176 C cytosol
A/B=828-1176 F RNA binding
A/B=828-1176 P regulation of translation
A/B=828-1176 P cellular membrane organization
A/B=828-1176 P post-Golgi vesicle-mediated transport
Sequences
Download file with secondary structure created by Stride  
1m8x.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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C (rna): 
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1m8x.pdb2.pdb:   [ download sequences in FASTA format ]
B (protein): 
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D (rna): 
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