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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1mnm.pdb | ABCD | EF | 0 |
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Biounits: | |||||
1mnm.pdb1.pdb | ABCD | EF | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | P11746_25-72 | 4.8e-22 | 1 | No_clan | A | 25 | 72 | EF | H-Bb H-Mj |
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Domain | P11746_25-72 | 4.2e-22 | 1 | No_clan | B | 25 | 72 | EF | H-Bb H-Mj L-Bb |
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Domain | P0CY08_132-189 | 7.4e-10 | 1 |
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C | 131 | 189 | EF | H-Bb H-Mj L-Bb L-Mn |
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Domain | P0CY08_132-189 | 7.4e-10 | 1 |
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D | 131 | 189 | EF | H-Bb H-Mj L-Bb L-Mn |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
mat alpha2 Homeodomain | C | N/A | N/A | EF | H-Bb H-Mj L-Bb L-Mn |
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mat alpha2 Homeodomain | D | N/A | N/A | EF | H-Bb H-Mj L-Bb L-Mn |
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MCM1 transcriptional regulator | A | N/A | N/A | EF | H-Bb H-Mj L-Bb L-Mn |
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MCM1 transcriptional regulator | B | N/A | N/A | EF | H-Bb H-Mj L-Bb |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A/B=1-100 | C | nuclear chromatin |
A/B=1-100 | F | DNA replication origin binding |
A/B=1-100 | F | RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription |
A/B=1-100 | F | RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription |
A/B=1-100 | F | sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity |
A/B=1-100 | F | RNA polymerase II core promoter proximal region sequence-specific DNA binding, bending |
A/B=1-100 | P | DNA-dependent DNA replication initiation |
A/B=1-100 | P | negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter |
A/B=1-100 | P | negative regulation of mating-type specific transcription from RNA polymerase II promoter |
A/B=1-100 | P | regulation of mating type switching |
A/B=1-100 | P | arginine metabolic process |
A/B=1-100 | P | positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter |
A/B=1-100 | P | positive regulation of transcription involved in G2/M-phase of mitotic cell cycle |
A/B=1-100 | P | positive regulation of mating-type specific transcription from RNA polymerase II promoter |
C/D=103-189 | C | nucleus |
C/D=103-189 | F | sequence-specific DNA binding transcription factor activity |
C/D=103-189 | F | sequence-specific DNA binding |
C/D=103-189 | P | transcription, DNA-dependent |
C/D=103-189 | P | donor selection |
Sequences
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1mnm.pdb1.pdb:
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E (dna):
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F (dna):
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A (protein):
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B (protein):
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C (protein):
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D (protein):
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