NPIDB: 1MNM structure

General information

PDB ID

1MNM

Title

YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE

PDB header

TRANSCRIPTION/DNA

Date

1997-11-03

Experimental method

X-RAY DIFFRACTION

Resolution (A)

2.25

Kind

dna

Organism

SYNTHETIC CONSTRUCT, SACCHAROMYCES CEREVISIAE


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Composition of PDB entry and biounits
File:	Protein chains:	DNA chains:	RNA chains:	No. of models:	Action:

PDB entry:

pdb1mnm.pdb	ABCD	EF		0

Biounits:

1mnm.pdb1.pdb	ABCD	EF		1

SCOP domains
Classification:	Protein:	Prot. chain:	Start res.:	End res.:	Nuc. chains:	Int. mode:	Action:

Class: All alpha proteins Fold: DNA/RNA-binding 3-helical bundle Superfamily: Homeodomain-like Family: Homeodomain	mat alpha2 Homeodomain	C	N/A	N/A	EF	H-Bb H-Mj L-Bb L-Mn
Class: All alpha proteins Fold: DNA/RNA-binding 3-helical bundle Superfamily: Homeodomain-like Family: Homeodomain	mat alpha2 Homeodomain	D	N/A	N/A	EF	H-Bb H-Mj L-Bb L-Mn
Class: Alpha and beta proteins (a+b) Fold: SRF-like Superfamily: SRF-like Family: SRF-like	MCM1 transcriptional regulator	A	N/A	N/A	EF	H-Bb H-Mj L-Bb L-Mn
Class: Alpha and beta proteins (a+b) Fold: SRF-like Superfamily: SRF-like Family: SRF-like	MCM1 transcriptional regulator	B	N/A	N/A	EF	H-Bb H-Mj L-Bb

GO terms
Protein chains:	GO type:	GO description:
A/B=1-100	C	cytosol
A/B=1-100	C	nuclear chromatin
A/B=1-100	C	nucleus
A/B=1-100	F	DNA replication origin binding
A/B=1-100	F	DNA-binding transcription activator activity, RNA polymerase II-specific
A/B=1-100	F	DNA-binding transcription factor activity, RNA polymerase II-specific
A/B=1-100	F	DNA-binding transcription repressor activity, RNA polymerase II-specific
A/B=1-100	F	protein dimerization activity
A/B=1-100	F	RNA polymerase II activating transcription factor binding
A/B=1-100	F	RNA polymerase II cis-regulatory region sequence-specific DNA binding
A/B=1-100	F	RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending
A/B=1-100	F	RNA polymerase II repressing transcription factor binding
A/B=1-100	F	sequence-specific DNA binding
A/B=1-100	P	arginine metabolic process
A/B=1-100	P	cell cycle
A/B=1-100	P	negative regulation of mating-type specific transcription from RNA polymerase II promoter
A/B=1-100	P	negative regulation of transcription by RNA polymerase II
A/B=1-100	P	positive regulation of mating-type specific transcription from RNA polymerase II promoter
A/B=1-100	P	positive regulation of transcription by RNA polymerase II
A/B=1-100	P	regulation of mating type switching
C/D=103-189	C	nucleus
C/D=103-189	F	DNA binding, bending
C/D=103-189	F	DNA-binding transcription repressor activity, RNA polymerase II-specific
C/D=103-189	F	sequence-specific DNA binding
C/D=103-189	P	negative regulation of mating-type specific transcription from RNA polymerase II promoter

Sequences

1mnm.pdb1.pdb: [ download sequences in FASTA format ]

E (dna):