Quick Links
![]() |
||||||||||||||||||||
|
||||||||||||||||||||
Composition of PDB entry and biounits
![]() |
|||||
File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1n6j.pdb | ABG | CD | 2 |
![]() ![]() |
|
Biounits: | |||||
1n6j.pdb1.pdb | ABG | CD | 1 |
![]() ![]() ![]() |
|
Pfam domains
![]() |
|||||||||||
Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
![]() |
Domain | Q02080_10-57 | 2.7e-24 | 1 | No_clan | A | 10 | 57 | CD | H-Bb H-Mj |
![]() ![]() |
![]() |
Domain | Q02080_10-57 | 2.5e-24 | 1 | No_clan | B | 10 | 57 | CD | H-Bb H-Mj |
![]() ![]() |
![]() |
Domain | Q9Y6J0_2159-2184 | 4.6e-18 | 1 | No_clan | G | 101 | 126 |
![]() ![]() |
||
SCOP domains
![]() |
|||||||
Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
Myocyte enhancer factor Mef2b core | A | N/A | N/A | CD | H-Bb L-Mn |
![]() ![]() |
|
Myocyte enhancer factor Mef2b core | B | N/A | N/A | CD | H-Bb H-Mj L-Bb L-Mn |
![]() ![]() |
|
GO terms | ||
Protein chains: | GO type: | GO description: |
A/B=2-94 | C | cell junction |
A/B=2-94 | C | cytosol |
A/B=2-94 | C | nuclear chromatin |
A/B=2-94 | C | nucleoplasm |
A/B=2-94 | C | nucleus |
A/B=2-94 | C | transcription regulator complex |
A/B=2-94 | F | DNA-binding transcription activator activity, RNA polymerase II-specific |
A/B=2-94 | F | DNA-binding transcription factor activity |
A/B=2-94 | F | DNA-binding transcription factor activity, RNA polymerase II-specific |
A/B=2-94 | F | histone deacetylase binding |
A/B=2-94 | F | protein dimerization activity |
A/B=2-94 | F | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
A/B=2-94 | F | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
A/B=2-94 | F | sequence-specific DNA binding |
A/B=2-94 | F | sequence-specific double-stranded DNA binding |
A/B=2-94 | F | transcription factor binding |
A/B=2-94 | F | transcription regulatory region sequence-specific DNA binding |
A/B=2-94 | P | cell differentiation |
A/B=2-94 | P | muscle organ development |
A/B=2-94 | P | positive regulation of transcription by RNA polymerase II |
G=2156-2190 | C | aggresome |
G=2156-2190 | C | cytosol |
G=2156-2190 | C | nucleoplasm |
G=2156-2190 | C | nucleus |
G=2156-2190 | F | protein phosphatase inhibitor activity |
G=2156-2190 | P | cell surface receptor signaling pathway |
G=2156-2190 | P | DNA replication-independent nucleosome assembly |
Sequences
![]() |
![]() |
1n6j.pdb1.pdb:
[
download sequences in FASTA format
]
|
C (dna):
Click "SHOW" for view sequence
D (dna):
Click "SHOW" for view sequence
A (protein):
Click "SHOW" for view sequence
B (protein):
Click "SHOW" for view sequence
G (protein):
Click "SHOW" for view sequence
|
|