General information
PDB ID 1NNE
Title CRYSTAL STRUCTURE OF THE MUTS-ADPBEF3-DNA COMPLEX
PDB header DNA BINDING PROTEIN/DNA
Date 2003-01-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.11
Kind dna
Organism THERMUS AQUATICUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1nne.pdb AB CD 0
Biounits:
1nne.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
MutS_V Domain Q56215_579-762 5.9e-72 1 CL0023 A 579 763   
MutS_III Domain Q56215_255-534 5e-39 1 No_clan A 255 534 C  S-Bb L-Bb 
MutS_I Domain Q56215_14-125 2.4e-35 1 No_clan A 14 125 CD  H-Bb S-Bb S-Mn L-Bb 
MutS_IV Domain Q56215_403-494 1.2e-27 1 No_clan A 403 494 C  S-Bb L-Bb 
MutS_II Domain Q56215_132-240 0.0000000065 1 No_clan A 132 240   
MutS_V Domain Q56215_579-762 3.1e-78 1 CL0023 B 1579 1763   
MutS_III Domain Q56215_255-534 5e-39 1 No_clan B 1255 1534 CD  S-Bb L-Bb 
MutS_I Domain Q56215_14-125 8.7e-32 1 No_clan B 1014 1125 D  L-Bb 
MutS_IV Domain Q56215_403-494 1.2e-27 1 No_clan B 1403 1494 CD  S-Bb L-Bb 
MutS_II Domain Q56215_132-240 0.0000000065 1 No_clan B 1132 1240   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA repair protein MutS, domain III
    Superfamily: DNA repair protein MutS, domain III
      Family: DNA repair protein MutS, domain III
DNA repair protein MutS, domain III A 267 541 C  S-Bb L-Bb 
Class: Alpha and beta proteins (a/b)
  Fold: P-loop containing nucleoside triphosphate hydrolases
    Superfamily: P-loop containing nucleoside triphosphate hydrolases
      Family: ABC transporter ATPase domain-like
DNA repair protein MutS, the C-terminal domain A 542 765 -
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: DNA repair protein MutS, domain II
      Family: DNA repair protein MutS, domain II
DNA repair protein MutS, domain II A 121 266 -
Class: Alpha and beta proteins (a+b)
  Fold: MutS N-terminal domain-like
    Superfamily: DNA repair protein MutS, domain I
      Family: DNA repair protein MutS, domain I
DNA repair protein MutS, domain I A 1 120 CD  H-Bb S-Bb S-Mn L-Bb 
Class: All alpha proteins
  Fold: DNA repair protein MutS, domain III
    Superfamily: DNA repair protein MutS, domain III
      Family: DNA repair protein MutS, domain III
DNA repair protein MutS, domain III B 1267 1541 CD  S-Bb L-Bb 
Class: Alpha and beta proteins (a/b)
  Fold: P-loop containing nucleoside triphosphate hydrolases
    Superfamily: P-loop containing nucleoside triphosphate hydrolases
      Family: ABC transporter ATPase domain-like
DNA repair protein MutS, the C-terminal domain B 1542 1765 -
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: DNA repair protein MutS, domain II
      Family: DNA repair protein MutS, domain II
DNA repair protein MutS, domain II B 1121 1266 -
Class: Alpha and beta proteins (a+b)
  Fold: MutS N-terminal domain-like
    Superfamily: DNA repair protein MutS, domain I
      Family: DNA repair protein MutS, domain I
DNA repair protein MutS, domain I B 1001 1120 D  L-Bb 
GO terms
Protein chains: GO type: GO description:
A/B=1-765 F ATP binding
A/B=1-765 F mismatched DNA binding
A/B=1-765 P mismatch repair
Sequences
Download file with secondary structure created by Stride  
1nne.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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B (protein): 
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