General information
PDB ID 1OB5
Title T. AQUATICUS ELONGATION FACTOR EF-TU COMPLEXED WITH THE ANTIBIOTIC ENACYLOXIN IIA, A GTP ANALOG, AND PHE-TRNA
PDB header HYDROLASE
Date 2003-01-24
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.1
Kind rna
Organism THERMUS AQUATICUS, SACCHAROMYCES CEREVISIAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1ob5.pdb ACE BDF 0
Biounits:
1ob5.pdb1.pdb ACE BDF 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
GTP_EFTU Domain Q01698_10-213 3.8e-62 1 CL0023 A 9 212 B   
GTP_EFTU_D3 Domain Q01698_310-405 7e-35 1 No_clan A 309 404 BF   
GTP_EFTU_D2 Domain Q01698_236-306 3e-18 1 CL0575 A 235 305 B   
GTP_EFTU Domain Q01698_10-213 3.8e-62 1 CL0023 C 9 212 D   
GTP_EFTU_D3 Domain Q01698_310-405 7e-35 1 No_clan C 309 404 BD   
GTP_EFTU_D2 Domain Q01698_236-306 3e-18 1 CL0575 C 235 305 D   
GTP_EFTU Domain Q01698_10-213 3.8e-62 1 CL0023 E 9 212 F   
GTP_EFTU_D3 Domain Q01698_310-405 7e-35 1 No_clan E 309 404 DF   
GTP_EFTU_D2 Domain Q01698_236-306 3e-18 1 CL0575 E 235 305 F   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All beta proteins
  Fold: Reductase/isomerase/elongation factor common domain
    Superfamily: Translation proteins
      Family: Elongation factors
Elongation factor Tu (EF-Tu), domain 2 A 213 312 B -
Class: All beta proteins
  Fold: Elongation factor/aminomethyltransferase common domain
    Superfamily: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
      Family: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Elongation factor Tu (EF-Tu) A 313 405 BF -
Class: Alpha and beta proteins (a/b)
  Fold: P-loop containing nucleoside triphosphate hydrolases
    Superfamily: P-loop containing nucleoside triphosphate hydrolases
      Family: G proteins
Elongation factor Tu (EF-Tu), N-terminal (G) domain A 9 212 B -
Class: All beta proteins
  Fold: Reductase/isomerase/elongation factor common domain
    Superfamily: Translation proteins
      Family: Elongation factors
Elongation factor Tu (EF-Tu), domain 2 C 213 312 D -
Class: All beta proteins
  Fold: Elongation factor/aminomethyltransferase common domain
    Superfamily: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
      Family: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Elongation factor Tu (EF-Tu) C 313 405 BD -
Class: Alpha and beta proteins (a/b)
  Fold: P-loop containing nucleoside triphosphate hydrolases
    Superfamily: P-loop containing nucleoside triphosphate hydrolases
      Family: G proteins
Elongation factor Tu (EF-Tu), N-terminal (G) domain C 9 212 D -
Class: All beta proteins
  Fold: Reductase/isomerase/elongation factor common domain
    Superfamily: Translation proteins
      Family: Elongation factors
Elongation factor Tu (EF-Tu), domain 2 E 213 312 F -
Class: All beta proteins
  Fold: Elongation factor/aminomethyltransferase common domain
    Superfamily: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
      Family: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Elongation factor Tu (EF-Tu) E 313 405 DF -
Class: Alpha and beta proteins (a/b)
  Fold: P-loop containing nucleoside triphosphate hydrolases
    Superfamily: P-loop containing nucleoside triphosphate hydrolases
      Family: G proteins
Elongation factor Tu (EF-Tu), N-terminal (G) domain E 9 212 F -
GO terms
Protein chains: GO type: GO description:
A/C/E=2-405 C cytoplasm
A/C/E=2-405 F GTP binding
A/C/E=2-405 F GTPase activity
A/C/E=2-405 F translation elongation factor activity
A/C/E=2-405 P GTP catabolic process
Sequences
Download file with secondary structure created by Stride  
1ob5.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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C (protein): 
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E (protein): 
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B (rna): 
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D (rna): 
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F (rna): 
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