General information
PDB ID 1ODH
Title STRUCTURE OF THE GCM DOMAIN BOUND TO DNA
PDB header TRANSCRIPTION FACTOR/DNA
Date 2003-02-19
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.85
Kind dna
Organism MUS MUSCULUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1odh.pdb A CD 0
Biounits:
1odh.pdb1.pdb A CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
GCM Family P70348_30-167 5.7e-73 1 CL0274 A 30 167 CD  H-Bb S-Bb S-Mj L-Bb L-Mj 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: GCM domain
    Superfamily: GCM domain
      Family: GCM domain
Mgcm1 A N/A N/A CD  H-Bb S-Bb L-Bb L-Mj 
GO terms
Protein chains: GO type: GO description:
A=1-174 C transcription factor complex
A=1-174 C nucleus
A=1-174 F sequence-specific DNA binding transcription factor activity
A=1-174 F zinc ion binding
A=1-174 F DNA binding
A=1-174 P astrocyte fate commitment
A=1-174 P branching involved in labyrinthine layer morphogenesis
A=1-174 P cell differentiation involved in embryonic placenta development
A=1-174 P transcription, DNA-dependent
Sequences
Download file with secondary structure created by Stride  
1odh.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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A (protein): 
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