General information
PDB ID 1OND
Title THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC
PDB header RIBOSOME
Date 2003-02-27
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.4
Kind rna
Organism DEINOCOCCUS RADIODURANS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1ond.pdb QZ 0 0
Biounits:
1ond.pdb1.pdb QZ 0 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L22 Domain Q9RXJ7_26-129 5.9e-35 1 No_clan Q 26 129   
Ribosomal_L32p Family P49228_5-59 4.2e-29 1 CL0167 Z 5 59   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Large subunit
50S subunit Q N/A N/A -
Class: Low resolution protein structures
  Fold: Ribosome and ribosomal fragments
    Superfamily: Ribosome and ribosomal fragments
      Family: Large subunit
50S subunit Z N/A N/A -
GO terms
Protein chains: GO type: GO description:
Q=1-134 C large ribosomal subunit
Q=1-134 F rRNA binding
Q=1-134 F structural constituent of ribosome
Q=1-134 P translation
Z=1-60 F metal ion binding
Sequences
Download file with secondary structure created by Stride  
1ond.pdb1.pdb:   [ download sequences in FASTA format ]
Q (protein): 
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Z (protein): 
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0 (rna): 
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