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Composition of PDB entry and biounits
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File: | Protein chains: | DNA chains: | RNA chains: | No. of models: | Action: |
PDB entry: | |||||
pdb1p3f.pdb | ABCDEFGH | IJ | 0 |
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Biounits: | |||||
1p3f.pdb1.pdb | ABCDEFGH | IJ | 1 |
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Pfam domains
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Name: | Type: | Domain: | E-value: | Significance: | Clan: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
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Domain | P84233_39-132 | 3.5e-46 | 1 |
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A | 437 | 531 | IJ | H-Bb S-Bb L-Bb L-Mn |
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Domain | P62799_26-99 | 2.9e-08 | 1 |
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B | 26 | 98 | IJ | S-Bb L-Bb |
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Domain | P06897_13-91 | 8.5e-16 | 1 |
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C | 815 | 890 | IJ | H-Bb S-Bb |
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Domain | P02281_33-102 | 7.3e-21 | 1 |
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D | 1232 | 1298 | IJ | S-Bb L-Bb |
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Domain | P84233_39-132 | 3.5e-46 | 1 |
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E | 637 | 731 | IJ | H-Bb H-Mj S-Bb L-Bb L-Mn |
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Domain | P62799_26-99 | 3e-08 | 1 |
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F | 225 | 298 | IJ | S-Bb L-Bb |
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Domain | P06897_13-91 | 6.1e-16 | 1 |
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G | 1013 | 1090 | IJ | H-Bb S-Bb |
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Domain | P02281_33-102 | 1.2e-21 | 1 |
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H | 1428 | 1498 | IJ | H-Bb S-Bb L-Bb |
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Family | P06897_92-120 | 2e-17 | 1 | No_clan | C | 891 | 918 |
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Family | P06897_92-120 | 2.5e-18 | 1 | No_clan | G | 1091 | 1119 |
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SCOP domains
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Classification: | Protein: | Prot. chain: | Start res.: | End res.: | Nuc. chains: | Int. mode: | Action: |
Histone H2B | D | N/A | N/A | IJ | H-Bb S-Bb L-Bb |
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Histone H2B | H | N/A | N/A | IJ | H-Bb S-Bb L-Bb |
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Histone H3 | A | N/A | N/A | IJ | H-Bb H-Mj S-Bb L-Bb L-Mn |
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Histone H3 | E | N/A | N/A | IJ | H-Bb H-Mj S-Bb L-Bb L-Mn |
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Histone H4 | B | N/A | N/A | IJ | H-Bb S-Bb L-Bb |
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Histone H4 | F | N/A | N/A | IJ | H-Bb H-Mj S-Bb L-Bb |
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Histone H2A | C | N/A | N/A | IJ | H-Bb S-Bb L-Bb |
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Histone H2A | G | N/A | N/A | IJ | H-Bb S-Bb L-Bb |
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GO terms | ||
Protein chains: | GO type: | GO description: |
A/E=2-136 | C | nucleus |
A/E=2-136 | C | nucleosome |
A/E=2-136 | F | DNA binding |
A/E=2-136 | P | nucleosome assembly |
Sequences
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1p3f.pdb1.pdb:
[
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I (dna):
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J (dna):
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A (protein):
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B (protein):
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C (protein):
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D (protein):
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E (protein):
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F (protein):
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G (protein):
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H (protein):
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