General information
PDB ID 1PVR
Title BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE
PDB header RECOMBINATION/DNA
Date 2003-06-28
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.65
Kind dna
Organism ENTEROBACTERIA PHAGE P1
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1pvr.pdb AB CD 0
Biounits:
1pvr.pdb1.pdb ABGH CDEF 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Phage_int_SAM_4 Domain 0.00072 0 CL0469 A 25 102 DE
Phage_int_SAM_4 Domain 0.00071 0 CL0469 B 25 102 CD
Phage_int_SAM_4 Domain 0.00072 0 CL0469 G 25 102 CF
Phage_int_SAM_4 Domain 0.00071 0 CL0469 H 25 102 EF
Phage_integrase Family P06956_138-330 1.3e-33 1 CL0382 A 138 330 DE  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Phage_integrase Family P06956_138-330 2e-33 1 CL0382 B 138 332 CD  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Phage_integrase Family 1.3e-33 1 CL0382 G 138 330 CF
Phage_integrase Family 2e-33 1 CL0382 H 138 332 EF
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase A 18 129 DEF  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase A 130 341 DE  H-Bb S-Bb L-Bb L-Mn 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase B 19 129 CDE  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase B 130 341 CD  H-Bb H-Mj L-Bb L-Mn 
GO terms
Protein chains: GO type: GO description:
A/B=2-343 F DNA binding
A/B=2-343 P DNA integration
A/B=2-343 P DNA recombination
Sequences
Download file with secondary structure created by Stride  
1pvr.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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E (dna): 
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F (dna): 
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A (protein): 
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B (protein): 
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G (protein): 
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H (protein): 
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