General information
PDB ID 1Q3V
Title CRYSTAL STRUCTURE OF A WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE: PHOSPHOTYROSINE COVALENT INTERMEDIATE
PDB header REPLICATION/DNA
Date 2003-08-01
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.91
Kind dna
Organism ENTEROBACTERIA PHAGE P1
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1q3v.pdb ABEF CXDGYH 0
Biounits:
1q3v.pdb1.pdb ABEF CXDGYH 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Phage_int_SAM_4 Domain 0.00069 0 CL0469 A 23 102 DX
Phage_int_SAM_4 Domain 0.00073 0 CL0469 B 26 102 CD
Phage_int_SAM_4 Domain 0.00072 0 CL0469 E 26 102 HY
Phage_int_SAM_4 Domain 0.00073 0 CL0469 F 26 102 GH
Phage_integrase Family P06956_138-330 6.4e-36 1 CL0382 A 138 330 DX  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Phage_integrase Family P06956_138-330 5.9e-36 1 CL0382 B 138 330 CDX  H-Bb H-Mj L-Bb 
Phage_integrase Family P06956_138-330 5.8e-36 1 CL0382 E 138 330 HY  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Phage_integrase Family P06956_138-330 5.9e-36 1 CL0382 F 138 330 GHY  H-Bb H-Mj L-Bb 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase A 10 129 DHX  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase A 130 341 DX  H-Bb H-Mj S-Bb L-Bb L-Mj 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase B 20 129 CD  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase B 130 341 CDX  H-Bb H-Mj S-Bb L-Bb L-Mn 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase E 21 129 DHY  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase E 130 341 HY  H-Bb H-Mj S-Bb L-Bb L-Mj L-Mn 
Class: All alpha proteins
  Fold: SAM domain-like
    Superfamily: lambda integrase-like, N-terminal domain
      Family: lambda integrase-like, N-terminal domain
Cre recombinase F 20 129 GHY  H-Bb H-Mj L-Bb 
Class: Alpha and beta proteins (a+b)
  Fold: DNA breaking-rejoining enzymes
    Superfamily: DNA breaking-rejoining enzymes
      Family: Lambda integrase-like, catalytic core
Cre recombinase F 130 341 GHY  H-Bb H-Mj S-Bb L-Bb L-Mn 
GO terms
Protein chains: GO type: GO description:
A/B/E/F=1-343 F DNA binding
A/B/E/F=1-343 P DNA integration
A/B/E/F=1-343 P DNA recombination
Sequences
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1q3v.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
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D (dna): 
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G (dna): 
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H (dna): 
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X (dna): 
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Y (dna): 
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A (protein): 
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B (protein): 
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E (protein): 
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F (protein): 
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