General information
PDB ID 1QAJ
Title CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN
PDB header TRANSFERASE/DNA
Date 1999-03-18
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism MOLONEY MURINE LEUKEMIA VIRUS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1qaj.pdb AB CD 0
Biounits:
1qaj.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RVT_1 Family P03355_760-932 8.8e-28 1 CL0027 A 101 273 CD   
RVT_1 Family P03355_760-932 8.6e-28 1 CL0027 B 101 273   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: Reverse transcriptase
MMLV reverse transcriptase A N/A N/A CD -
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: Reverse transcriptase
MMLV reverse transcriptase B N/A N/A -
GO terms
Protein chains: GO type: GO description:
A/B=683-937 C host cell plasma membrane
A/B=683-937 C membrane
A/B=683-937 C viral capsid
A/B=683-937 F ribonuclease H activity
A/B=683-937 F DNA binding
A/B=683-937 F structural molecule activity
A/B=683-937 F RNA-directed DNA polymerase activity
A/B=683-937 F aspartic-type endopeptidase activity
A/B=683-937 F DNA-directed DNA polymerase activity
A/B=683-937 F RNA binding
A/B=683-937 F zinc ion binding
A/B=683-937 P proteolysis
A/B=683-937 P virus-host interaction
A/B=683-937 P virion assembly
A/B=683-937 P DNA recombination
A/B=683-937 P DNA integration
A/B=683-937 P RNA-dependent DNA replication
A/B=683-937 P nucleic acid phosphodiester bond hydrolysis
Sequences
Download file with secondary structure created by Stride  
1qaj.pdb1.pdb:   [ download sequences in FASTA format ]
C (dna): 
Click "SHOW" for view sequence
D (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
B (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2019

text