General information
PDB ID 1S0V
Title STRUCTURAL BASIS FOR SUBSTRATE SELECTION BY T7 RNA POLYMERASE
PDB header TRANSFERASE/DNA-RNA HYBRID
Date 2004-01-05
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.2
Kind hybrid
Organism ENTEROBACTERIA PHAGE T7
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1s0v.pdb ABCD EGHJKMNP FILO 0
Biounits:
1s0v.pdb1.pdb A EG F 1
1s0v.pdb2.pdb B HJ I 1
1s0v.pdb3.pdb C KM L 1
1s0v.pdb4.pdb D NP O 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
RPOL_N Domain P00573_35-325 5.8e-33 1 No_clan A 35 325 E   
RPOL_N Domain P00573_35-325 5.8e-33 1 No_clan B 35 325 H   
RPOL_N Domain P00573_35-325 5.8e-33 1 No_clan C 35 325 K   
RPOL_N Domain P00573_35-325 5.8e-33 1 No_clan D 35 325 N   
RNA_pol Family P00573_450-883 2.3e-105 1 No_clan A 450 883 EFG   
RNA_pol Family P00573_450-883 2.3e-105 1 No_clan B 450 883 HIJ   
RNA_pol Family P00573_450-883 2.3e-105 1 No_clan C 450 883 KL   
RNA_pol Family P00573_450-883 2.3e-105 1 No_clan D 450 883 NOP   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: T7 RNA polymerase
T7 RNA polymerase A N/A N/A EFG  H-Bb H-Mn S-Bb L-Bb L-Mj L-Mn 
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: T7 RNA polymerase
T7 RNA polymerase B N/A N/A HIJ  H-Bb H-Mj H-Mn L-Bb 
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: T7 RNA polymerase
T7 RNA polymerase C N/A N/A KL  H-Bb H-Mj H-Mn L-Bb 
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: T7 RNA polymerase
T7 RNA polymerase D N/A N/A NOP  H-Bb H-Mj H-Mn L-Bb 
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-882 F DNA-directed RNA polymerase activity
A/B/C/D=1-882 F DNA binding
A/B/C/D=1-882 P transcription, DNA-dependent
Sequences
Download file with secondary structure created by Stride  
1s0v.pdb1.pdb:   [ download sequences in FASTA format ]
E (dna): 
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G (dna): 
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A (protein): 
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F (rna): 
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1s0v.pdb2.pdb:   [ download sequences in FASTA format ]
H (dna): 
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J (dna): 
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B (protein): 
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I (rna): 
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1s0v.pdb3.pdb:   [ download sequences in FASTA format ]
K (dna): 
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M (dna): 
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C (protein): 
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L (rna): 
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1s0v.pdb4.pdb:   [ download sequences in FASTA format ]
N (dna): 
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P (dna): 
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D (protein): 
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O (rna): 
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