General information
PDB ID 1SER
Title THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER
PDB header LIGASE/RNA
Date 1994-02-21
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.9
Kind rna
Organism THERMUS THERMOPHILUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1ser.pdb AB T 0
Biounits:
1ser.pdb1.pdb AB T 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
tRNA-synt_2b Domain P34945_213-395 2.6e-24 1 CL0040 A 213 395   
Seryl_tRNA_N Domain P34945_1-105 0.00019 0 CL0298 A 1 100   
tRNA-synt_2b Domain P34945_213-395 3.4e-24 1 CL0040 B 713 895 T   
Seryl_tRNA_N Domain P34945_1-105 8.4e-22 1 CL0298 B 501 605 T   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: Long alpha-hairpin
    Superfamily: tRNA-binding arm
      Family: Seryl-tRNA synthetase (SerRS)
Seryl-tRNA synthetase (SerRS) A 1 110 -
Class: All alpha proteins
  Fold: Long alpha-hairpin
    Superfamily: tRNA-binding arm
      Family: Seryl-tRNA synthetase (SerRS)
Seryl-tRNA synthetase (SerRS) B 501 610 T -
Class: Alpha and beta proteins (a+b)
  Fold: Class II aaRS and biotin synthetases
    Superfamily: Class II aaRS and biotin synthetases
      Family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
Seryl-tRNA synthetase (SerRS) A 111 421 T -
Class: Alpha and beta proteins (a+b)
  Fold: Class II aaRS and biotin synthetases
    Superfamily: Class II aaRS and biotin synthetases
      Family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
Seryl-tRNA synthetase (SerRS) B 611 921 T -
GO terms
Protein chains: GO type: GO description:
A/B=1-421 C cytoplasm
A/B=1-421 F ATP binding
A/B=1-421 F serine-tRNA ligase activity
A/B=1-421 P selenocysteinyl-tRNA(Sec) biosynthetic process
A/B=1-421 P seryl-tRNA aminoacylation
Sequences
Download file with secondary structure created by Stride  
1ser.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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T (rna): 
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