General information
PDB ID 1SI3
Title CRYSTAL STRUCTURE OF THE PAZ DOMAIN OF HUMAN EIF2C1 IN COMPLEX WITH A 9-MER SIRNA-LIKE DUPLEX
PDB header GENE REGULATION/RNA
Date 2004-02-27
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.6
Kind rna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1si3.pdb A B 0
Biounits:
1si3.pdb1.pdb AD BC 0
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
PAZ Domain Q9UL18_229-349 4.9e-29 1 CL0638 A 228 349 BC   
PAZ Domain 4.9e-29 1 CL0638 D 228 349 CB
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All beta proteins
  Fold: SH3-like barrel
    Superfamily: PAZ domain
      Family: PAZ domain
Eukaryotic translation initiation factor 2C 1, EIF2C1 A N/A N/A BC -
GO terms
Protein chains: GO type: GO description:
A=225-369 C cytoplasmic mRNA processing body
A=225-369 C polysome
A=225-369 C micro-ribonucleoprotein complex
A=225-369 C cytosol
A=225-369 F RNA binding
A=225-369 P transcription, DNA-dependent
A=225-369 P regulation of transcription, DNA-dependent
A=225-369 P Notch signaling pathway
A=225-369 P negative regulation of translation involved in gene silencing by miRNA
A=225-369 P nuclear-transcribed mRNA catabolic process
A=225-369 P gene expression
Sequences
Download file with secondary structure created by Stride  
1si3.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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D (protein): 
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B (rna): 
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C (rna): 
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