General information
PDB ID 1T0K
Title JOINT X-RAY AND NMR REFINEMENT OF YEAST L30E-MRNA COMPLEX
PDB header RIBOSOME
Date 2004-04-09
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.24
Kind rna
Organism ESCHERICHIA COLI, SACCHAROMYCES CEREVISIAE
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1t0k.pdb AB CD 0
Biounits:
1t0k.pdb1.pdb AB CD 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Ribosomal_L7Ae Domain P14120_9-102 4.7e-23 1 CL0101 B 9 102 CD   
SBP_bac_8 Family 9.9e-43 1 CL0177 A 22 319
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a/b)
  Fold: Periplasmic binding protein-like II
    Superfamily: Periplasmic binding protein-like II
      Family: Phosphate binding protein-like
D-maltodextrin-binding protein, MBP A N/A N/A -
Class: Alpha and beta proteins (a+b)
  Fold: Bacillus chorismate mutase-like
    Superfamily: L30e-like
      Family: L30e/L7ae ribosomal proteins
Eukaryotic ribosomal protein L30 (L30e) B N/A N/A CD -
GO terms
Protein chains: GO type: GO description:
A=29-392 C ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
A=29-392 C periplasmic space
A=29-392 F maltose transmembrane transporter activity
A=29-392 F transporter activity
A=29-392 P maltose transport
A=29-392 P maltodextrin transport
A=29-392 P response to DNA damage stimulus
B=1-105 C cytosolic large ribosomal subunit
B=1-105 F structural constituent of ribosome
B=1-105 F pre-mRNA 5'-splice site binding
B=1-105 P negative regulation of translation
B=1-105 P rRNA processing
B=1-105 P negative regulation of nuclear mRNA splicing, via spliceosome
B=1-105 P cytoplasmic translation
Sequences
Download file with secondary structure created by Stride  
1t0k.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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C (rna): 
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D (rna): 
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