General information
PDB ID 1T38
Title HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING O6-METHYLGUANINE
PDB header TRANSFERASE/DNA
Date 2004-04-25
Experimental method X-RAY DIFFRACTION
Resolution (A) 3.2
Kind dna
Organism HOMO SAPIENS
Download
complex
View in
Jmol
Quick Links
PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1t38.pdb A BC 0
Biounits:
1t38.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
DNA_binding_1 Domain P16455_93-174 1.1e-26 1 No_clan A 93 174 BC  H-Bb H-Mj H-Mn L-Bb 
Methyltransf_1N Domain P16455_6-90 7.9e-15 1 No_clan A 6 90   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: DNA/RNA-binding 3-helical bundle
    Superfamily: Methylated DNA-protein cysteine methyltransferase, C-terminal domain
      Family: Methylated DNA-protein cysteine methyltransferase, C-terminal domain
O6-alkylguanine-DNA alkyltransferase A 92 176 BC  H-Bb H-Mj H-Mn L-Bb 
Class: Alpha and beta proteins (a/b)
  Fold: Ribonuclease H-like motif
    Superfamily: Methylated DNA-protein cysteine methyltransferase domain
      Family: Methylated DNA-protein cysteine methyltransferase domain
O6-alkylguanine-DNA alkyltransferase A 6 91 -
GO terms
Protein chains: GO type: GO description:
A=1-176 C membrane
A=1-176 C nucleoplasm
A=1-176 C nucleus
A=1-176 F DNA binding
A=1-176 F DNA-methyltransferase activity
A=1-176 F metal ion binding
A=1-176 F methylated-DNA-[protein]-cysteine S-methyltransferase activity
A=1-176 F methyltransferase activity
A=1-176 P DNA dealkylation involved in DNA repair
A=1-176 P DNA ligation
A=1-176 P DNA repair
A=1-176 P negative regulation of apoptotic process
A=1-176 P positive regulation of double-strand break repair
Sequences
Download file with secondary structure created by Stride  
1t38.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
Click "SHOW" for view sequence
C (dna): 
Click "SHOW" for view sequence
A (protein): 
Click "SHOW" for view sequence
© NPIDB team 2003 - 2021

text