General information
PDB ID 1T3N
Title STRUCTURE OF THE CATALYTIC CORE OF DNA POLYMERASE IOTA IN COMPLEX WITH DNA AND DTTP
PDB header REPLICATION/DNA
Date 2004-04-27
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.3
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
 PDIdb 
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1t3n.pdb AB TP 2
Biounits:
1t3n.pdb1.pdb AB TP 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
IMS_C Domain Q9UNA4_320-439 0.000000000035 1 No_clan A 295 414 PT  H-Bb S-Bb L-Bb 
IMS_C Domain Q9UNA4_320-439 0.000000000035 1 No_clan B 715 834 PT  H-Bb S-Bb S-Mj L-Bb L-Mj 
IMS Family Q9UNA4_58-236 2.2e-46 1 No_clan A 33 211 P  H-Bb 
Cdd1 Family 0.000017 0 CL0198 A 230 283 T
IMS Family Q9UNA4_58-236 2.2e-46 1 No_clan B 453 631 PT  H-Bb S-Bb 
Cdd1 Family 0.000017 0 CL0198 B 650 703 P
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: Lesion bypass DNA polymerase (Y-family), little finger domain
    Superfamily: Lesion bypass DNA polymerase (Y-family), little finger domain
      Family: Lesion bypass DNA polymerase (Y-family), little finger domain
DNA polymerase iota A 300 414 PT -
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: Lesion bypass DNA polymerase (Y-family), catalytic domain
DNA polymerase iota A 27 299 PT -
Class: Alpha and beta proteins (a+b)
  Fold: Lesion bypass DNA polymerase (Y-family), little finger domain
    Superfamily: Lesion bypass DNA polymerase (Y-family), little finger domain
      Family: Lesion bypass DNA polymerase (Y-family), little finger domain
DNA polymerase iota B 720 834 PT -
Class: Multi-domain proteins (alpha and beta)
  Fold: DNA/RNA polymerases
    Superfamily: DNA/RNA polymerases
      Family: Lesion bypass DNA polymerase (Y-family), catalytic domain
DNA polymerase iota B 447 719 PT -
GO terms
Protein chains: GO type: GO description:
A/B=52-439 C nucleoplasm
A/B=52-439 F DNA-directed DNA polymerase activity
A/B=52-439 F damaged DNA binding
A/B=52-439 F metal ion binding
A/B=52-439 P DNA repair
A/B=52-439 P DNA replication
Sequences
Download file with secondary structure created by Stride  
1t3n.pdb1.pdb:   [ download sequences in FASTA format ]
P (dna): 
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T (dna): 
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A (protein): 
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B (protein): 
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