General information
PDB ID 1TFW
Title HOW CCA IS ADDED TO THE 3' END OF IMMATURE TRNA WITHOUT THE USE OF AN OLIGONUCLEOTIDE TEMPLATE
PDB header TRANSFERASE/RNA
Date 2004-05-27
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.2
Kind rna
Organism ARCHAEOGLOBUS FULGIDUS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
PRIDB
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1tfw.pdb ABCD EHFIGJ 0
Biounits:
1tfw.pdb1.pdb AB EHGJ 1
1tfw.pdb2.pdb CD FI 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
tRNA_NucTransf2 Domain O28126_146-255 2.3e-40 1 No_clan A 146 255 JG   
tRNA_NucTransf2 Domain O28126_146-255 2.3e-40 1 No_clan B 146 255 H   
tRNA_NucTransf2 Domain O28126_146-255 2.3e-40 1 No_clan C 146 255   
tRNA_NucTransf2 Domain O28126_146-255 2.3e-40 1 No_clan D 146 255 I   
NTP_transf_2 Family O28126_25-133 1.7e-18 1 CL0260 A 25 133 GJ   
NTP_transf_2 Family O28126_25-133 1.7e-18 1 CL0260 B 25 133 H   
NTP_transf_2 Family O28126_25-133 1.7e-18 1 CL0260 C 25 133   
NTP_transf_2 Family O28126_25-133 1.7e-18 1 CL0260 D 25 133 I   
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: All alpha proteins
  Fold: PAP/OAS1 substrate-binding domain
    Superfamily: PAP/OAS1 substrate-binding domain
      Family: Archaeal tRNA CCA-adding enzyme substrate-binding domain
tRNA nucleotidyltransferase, second domain A 143 257 JG -
Class: Alpha and beta proteins (a+b)
  Fold: Nucleotidyltransferase
    Superfamily: Nucleotidyltransferase
      Family: Archaeal tRNA CCA-adding enzyme catalytic domain
tRNA nucleotidyltransferase, N-terminal domain A 1 142 GJ -
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain
      Family: Archaeal tRNA CCA-adding enzyme
tRNA nucleotidyltransferase, C-terminal domain A 258 437 G -
Class: All alpha proteins
  Fold: PAP/OAS1 substrate-binding domain
    Superfamily: PAP/OAS1 substrate-binding domain
      Family: Archaeal tRNA CCA-adding enzyme substrate-binding domain
tRNA nucleotidyltransferase, second domain B 143 257 H -
Class: Alpha and beta proteins (a+b)
  Fold: Nucleotidyltransferase
    Superfamily: Nucleotidyltransferase
      Family: Archaeal tRNA CCA-adding enzyme catalytic domain
tRNA nucleotidyltransferase, N-terminal domain B 1 142 H -
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain
      Family: Archaeal tRNA CCA-adding enzyme
tRNA nucleotidyltransferase, C-terminal domain B 258 437 EH -
Class: All alpha proteins
  Fold: PAP/OAS1 substrate-binding domain
    Superfamily: PAP/OAS1 substrate-binding domain
      Family: Archaeal tRNA CCA-adding enzyme substrate-binding domain
tRNA nucleotidyltransferase, second domain C 143 257 -
Class: Alpha and beta proteins (a+b)
  Fold: Nucleotidyltransferase
    Superfamily: Nucleotidyltransferase
      Family: Archaeal tRNA CCA-adding enzyme catalytic domain
tRNA nucleotidyltransferase, N-terminal domain C 1 142 -
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain
      Family: Archaeal tRNA CCA-adding enzyme
tRNA nucleotidyltransferase, C-terminal domain C 258 437 -
Class: All alpha proteins
  Fold: PAP/OAS1 substrate-binding domain
    Superfamily: PAP/OAS1 substrate-binding domain
      Family: Archaeal tRNA CCA-adding enzyme substrate-binding domain
tRNA nucleotidyltransferase, second domain D 143 257 I -
Class: Alpha and beta proteins (a+b)
  Fold: Nucleotidyltransferase
    Superfamily: Nucleotidyltransferase
      Family: Archaeal tRNA CCA-adding enzyme catalytic domain
tRNA nucleotidyltransferase, N-terminal domain D 1 142 I -
Class: Alpha and beta proteins (a+b)
  Fold: Ferredoxin-like
    Superfamily: PAP/Archaeal CCA-adding enzyme, C-terminal domain
      Family: Archaeal tRNA CCA-adding enzyme
tRNA nucleotidyltransferase, C-terminal domain D 258 437 FI -
GO terms
Protein chains: GO type: GO description:
A/B/C/D=1-437 F metal ion binding
A/B/C/D=1-437 F CTP:tRNA cytidylyltransferase activity
A/B/C/D=1-437 F ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity
A/B/C/D=1-437 F RNA binding
A/B/C/D=1-437 F ATP binding
A/B/C/D=1-437 F tRNA adenylyltransferase activity
A/B/C/D=1-437 F CTP:3'-cytidine-tRNA cytidylyltransferase activity
A/B/C/D=1-437 F tRNA cytidylyltransferase activity
A/B/C/D=1-437 P tRNA 3'-terminal CCA addition
A/B/C/D=1-437 P RNA repair
Sequences
Download file with secondary structure created by Stride  
1tfw.pdb1.pdb:   [ download sequences in FASTA format ]
A (protein): 
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B (protein): 
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E (rna): 
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G (rna): 
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H (rna): 
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J (rna): 
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1tfw.pdb2.pdb:   [ download sequences in FASTA format ]
C (protein): 
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D (protein): 
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F (rna): 
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I (rna): 
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