General information
PDB ID 1TGH
Title TATA BINDING PROTEIN (TBP)/DNA COMPLEX
PDB header TRANSCRIPTION/DNA
Date 1996-02-13
Experimental method X-RAY DIFFRACTION
Resolution (A) 2.9
Kind dna
Organism HOMO SAPIENS
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PDB PDBe MMDB Jena OCA
CATH PDBsum HSSP PDBePISA UniProt
ProteopediA BIPA
Composition of PDB entry and biounits
File: Protein chains: DNA chains: RNA chains: No. of models: Action:
PDB entry:
pdb1tgh.pdb A BC 0
Biounits:
1tgh.pdb1.pdb A BC 1
Pfam domains
Name: Type: Domain: E-value: Significance: Clan: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
TBP Domain P20226_162-244 6.2e-33 1 CL0407 A 158 240 BC  S-Bb S-Mn L-Bb L-Mj L-Mn 
TBP Domain P20226_252-335 9.9e-32 1 CL0407 A 248 331 BC  S-Bb S-Mn L-Bb L-Mj L-Mn 
SCOP domains
Classification: Protein: Prot. chain: Start res.: End res.: Nuc. chains: Int. mode: Action:
Class: Alpha and beta proteins (a+b)
  Fold: TBP-like
    Superfamily: TATA-box binding protein-like
      Family: TATA-box binding protein (TBP), C-terminal domain
TATA-box binding protein (TBP), C-terminal domain A 155 252 BC  S-Bb S-Mn L-Bb L-Mn 
Class: Alpha and beta proteins (a+b)
  Fold: TBP-like
    Superfamily: TATA-box binding protein-like
      Family: TATA-box binding protein (TBP), C-terminal domain
TATA-box binding protein (TBP), C-terminal domain A 253 334 BC  S-Bb S-Mn L-Bb L-Mn 
GO terms
Protein chains: GO type: GO description:
A=156-339 C cytoplasm
A=156-339 C female pronucleus
A=156-339 C male pronucleus
A=156-339 C nuclear chromatin
A=156-339 C nuclear euchromatin
A=156-339 C nucleoplasm
A=156-339 C nucleus
A=156-339 C protein-containing complex
A=156-339 C transcription factor TFIIA complex
A=156-339 C transcription factor TFIID complex
A=156-339 C transcription factor TFIIIB complex
A=156-339 C transcription preinitiation complex
A=156-339 C transcription regulator complex
A=156-339 F aryl hydrocarbon receptor binding
A=156-339 F core promoter sequence-specific DNA binding
A=156-339 F DNA-binding transcription factor activity
A=156-339 F enzyme binding
A=156-339 F repressing transcription factor binding
A=156-339 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
A=156-339 F RNA polymerase II core promoter sequence-specific DNA binding
A=156-339 F RNA polymerase II general transcription initiation factor activity
A=156-339 F RNA polymerase II general transcription initiation factor binding
A=156-339 F RNA polymerase II repressing transcription factor binding
A=156-339 F RNA polymerase III general transcription initiation factor activity
A=156-339 F RNA polymerase III transcription regulatory region sequence-specific DNA binding
A=156-339 F TFIIB-class transcription factor binding
A=156-339 F transcription factor binding
A=156-339 F transcription regulatory region sequence-specific DNA binding
A=156-339 P positive regulation of gene expression, epigenetic
A=156-339 P positive regulation of transcription, DNA-templated
A=156-339 P regulation of signal transduction by p53 class mediator
A=156-339 P RNA polymerase II preinitiation complex assembly
A=156-339 P RNA polymerase III preinitiation complex assembly
A=156-339 P snRNA transcription by RNA polymerase II
A=156-339 P spermatogenesis
A=156-339 P termination of RNA polymerase I transcription
A=156-339 P transcription by RNA polymerase II
A=156-339 P transcription by RNA polymerase III
A=156-339 P transcription elongation from RNA polymerase I promoter
A=156-339 P transcription initiation from RNA polymerase I promoter
A=156-339 P transcription initiation from RNA polymerase II promoter
A=156-339 P viral process
Sequences
Download file with secondary structure created by Stride  
1tgh.pdb1.pdb:   [ download sequences in FASTA format ]
B (dna): 
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C (dna): 
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A (protein): 
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